RNA–Protein interactions for RNA: ENST00000464088.5

CD58-204, Transcript of CD58 molecule, humanhuman

TSL 1 (best)

Gene CD58, Length 874 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD58-204ENST00000464088 LMAN2LQ9H0V9 348 aa23.07■■□□□ 1.28
CD58-204ENST00000464088 POLR3FQ9H1D9 316 aaPredicted RBP23.07■■□□□ 1.28
CD58-204ENST00000464088 GINS2Q9Y248 185 aa23.07■■□□□ 1.28
CD58-204ENST00000464088 USP34Q70CQ2 3546 aa23.07■■□□□ 1.28
CD58-204ENST00000464088 A0A087WZ62 844 aa23.06■■□□□ 1.28
CD58-204ENST00000464088 MBTPS2O43462 519 aa23.06■■□□□ 1.28
CD58-204ENST00000464088 UPP2O95045 317 aa23.06■■□□□ 1.28
CD58-204ENST00000464088 RB1P06400 928 aa23.06■■□□□ 1.28
CD58-204ENST00000464088 LINC00271P0C7V0 271 aa23.06■■□□□ 1.28
CD58-204ENST00000464088 GLRA2P23416 452 aa23.06■■□□□ 1.28
CD58-204ENST00000464088 E2F4Q16254 413 aa23.06■■□□□ 1.28
CD58-204ENST00000464088 ARSHQ5FYA8 562 aa23.06■■□□□ 1.28
CD58-204ENST00000464088 BMP8AQ7Z5Y6 402 aa23.06■■□□□ 1.28
CD58-204ENST00000464088 LARP4BQ92615 738 aaKnown RBP23.06■■□□□ 1.28
CD58-204ENST00000464088 FDXACB1Q9BRP7 624 aaPredicted RBP23.06■■□□□ 1.28
CD58-204ENST00000464088 PANK2Q9BZ23 570 aa23.06■■□□□ 1.28
CD58-204ENST00000464088 IFT122Q9HBG6 1241 aa23.06■■□□□ 1.28
CD58-204ENST00000464088 NOC2LQ9Y3T9 749 aaKnown RBP23.06■■□□□ 1.28
CD58-204ENST00000464088 MYH11P35749 1972 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 SSBP05455 408 aaKnown RBP eCLIP23.05■■□□□ 1.28
CD58-204ENST00000464088 DARSP14868 501 aaKnown RBP23.05■■□□□ 1.28
CD58-204ENST00000464088 CMA1P23946 247 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 GUCY2CP25092 1073 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 MAPK7Q13164 816 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 MXD4Q14582 209 aaPredicted RBP23.05■■□□□ 1.28
CD58-204ENST00000464088 DAW1Q8N136 415 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 PDILTQ8N807 584 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 NLRP7Q8WX94 980 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 APBB2Q92870 758 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 NLRP4Q96MN2 994 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 IFIH1Q9BYX4 1025 aaKnown RBP23.05■■□□□ 1.28
CD58-204ENST00000464088 ERVK-5Q9HDB9 667 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 KCND2Q9NZV8 630 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 MUTYHQ9UIF7 546 aa23.05■■□□□ 1.28
CD58-204ENST00000464088 FAM237AA0A1B0GTK4 181 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 A0A1W2PQ27 194 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 A0A1W2PQ64 194 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 A0A1W2PQD8 194 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 EIF4BP23588 611 aaKnown RBP23.04■■□□□ 1.28
CD58-204ENST00000464088 CD52P31358 61 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 STAT6P42226 847 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 POU5F1BQ06416 359 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 DLX2Q07687 328 aaPredicted RBP23.04■■□□□ 1.28
CD58-204ENST00000464088 HYAL1Q12794 435 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 CAPSQ13938 189 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 FAM102BQ5T8I3 360 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 FAM228AQ86W67 206 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 IFNLR1Q8IU57 520 aaPredicted RBP23.04■■□□□ 1.28
CD58-204ENST00000464088 RNF135Q8IUD6 432 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 BSNDQ8WZ55 320 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 EDAQ92838 391 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 POLD4Q9HCU8 107 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 FAM13BQ9NYF5 915 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 PADI3Q9ULW8 664 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 HPSEQ9Y251 543 aa23.04■■□□□ 1.28
CD58-204ENST00000464088 HIP1RO75146 1068 aa23.03■■□□□ 1.28
CD58-204ENST00000464088 BMPR1AP36894 532 aa23.03■■□□□ 1.28
CD58-204ENST00000464088 SMAD4Q13485 552 aaKnown RBP23.03■■□□□ 1.28
CD58-204ENST00000464088 GPBP1Q86WP2 473 aa23.03■■□□□ 1.28
CD58-204ENST00000464088 FIBCD1Q8N539 461 aa23.03■■□□□ 1.28
CD58-204ENST00000464088 RNF149Q8NC42 400 aa23.03■■□□□ 1.28
CD58-204ENST00000464088 KIFAP3Q92845 792 aa23.03■■□□□ 1.28
CD58-204ENST00000464088 PHOX2BQ99453 314 aa23.03■■□□□ 1.28
CD58-204ENST00000464088 C11orf84Q9BUA3 381 aaPredicted RBP23.03■■□□□ 1.28
CD58-204ENST00000464088 TIPINQ9BVW5 301 aa23.03■■□□□ 1.28
CD58-204ENST00000464088 GCOM2Q9BZD3 368 aaPredicted RBP23.03■■□□□ 1.28
CD58-204ENST00000464088 RWDD3Q9Y3V2 267 aa23.03■■□□□ 1.28
CD58-204ENST00000464088 RPS6KA5O75582 802 aa23.02■■□□□ 1.28
CD58-204ENST00000464088 SRGAP2CP0DJJ0 459 aa23.02■■□□□ 1.28
CD58-204ENST00000464088 CTNNB1P35222 781 aa23.02■■□□□ 1.28
CD58-204ENST00000464088 DHX8Q14562 1220 aaKnown RBP23.02■■□□□ 1.28
CD58-204ENST00000464088 PRSS33Q8NF86 280 aa23.02■■□□□ 1.28
CD58-204ENST00000464088 CLP1Q92989 425 aaKnown RBP23.02■■□□□ 1.28
CD58-204ENST00000464088 SCLT1Q96NL6 688 aa23.02■■□□□ 1.28
CD58-204ENST00000464088 KCNH3Q9ULD8 1083 aa23.02■■□□□ 1.28
CD58-204ENST00000464088 NPHP3-ACAD11A0A0J9YXS1 232 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 GRM6O15303 877 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 PFKFB1P16118 471 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 PTENP60484 403 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 PAK2Q13177 524 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 TFDP1Q14186 410 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 SRGAP1Q7Z6B7 1085 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 IQUBQ8NA54 791 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 DHX58Q96C10 678 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 PRRX2Q99811 253 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 NFKBIZQ9BYH8 718 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 TMX1Q9H3N1 280 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 CUEDC2Q9H467 287 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 MINDY3Q9H8M7 445 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 RC3H2Q9HBD1 1191 aaKnown RBP23.01■■□□□ 1.27
CD58-204ENST00000464088 ST3GAL5Q9UNP4 418 aa23.01■■□□□ 1.27
CD58-204ENST00000464088 A0A1B0GVL5 298 aa23■■□□□ 1.27
CD58-204ENST00000464088 GPR182O15218 404 aa23■■□□□ 1.27
CD58-204ENST00000464088 POLR2DO15514 142 aaKnown RBP23■■□□□ 1.27
CD58-204ENST00000464088 TBX10O75333 385 aa23■■□□□ 1.27
CD58-204ENST00000464088 CSDE1O75534 798 aaKnown RBP23■■□□□ 1.27
CD58-204ENST00000464088 NAMPTP43490 491 aa23■■□□□ 1.27
CD58-204ENST00000464088 PTPN5P54829 565 aa23■■□□□ 1.27
CD58-204ENST00000464088 GIT2Q14161 759 aa23■■□□□ 1.27
CD58-204ENST00000464088 CLUL1Q15846 466 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms