RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 PTENP60484 403 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 RNASELQ05823 741 aaKnown RBP16■□□□□ 0.15
SNRNP40-203ENST00000463988 ST3GAL1Q11201 340 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 TFDP1Q14186 410 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 SAFBQ15424 915 aaKnown RBP eCLIP16■□□□□ 0.15
SNRNP40-203ENST00000463988 UBXN11Q5T124 520 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 SYCE2Q6PIF2 218 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 VPS52Q8N1B4 723 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 URGCPQ8TCY9 931 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 CCDC51Q96ER9 411 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 LLPHQ9BRT6 129 aaKnown RBP16■□□□□ 0.15
SNRNP40-203ENST00000463988 ZBP1Q9H171 429 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 UBN1Q9NPG3 1134 aa16■□□□□ 0.15
SNRNP40-203ENST00000463988 CLASP2O75122 1294 aaKnown RBP15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 ERLIN2O94905 339 aa15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 CXCL14O95715 111 aa15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 CTSAP10619 480 aa15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 NCLP19338 710 aaKnown RBP15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 ARL2P36404 184 aa15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 NCBP1Q09161 790 aaKnown RBP15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 ORC2Q13416 577 aaPredicted RBP15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 LONRF3Q496Y0 759 aa15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 TPRNQ4KMQ1 711 aa15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 EDAQ92838 391 aa15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 NFKBIZQ9BYH8 718 aa15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 RSAD1Q9HA92 442 aa15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 BMP2KQ9NSY1 1161 aaPredicted RBP15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 INPP5FQ9Y2H2 1132 aa15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 HCFC2Q9Y5Z7 792 aa15.99■□□□□ 0.15
SNRNP40-203ENST00000463988 ARID2Q68CP9 1835 aa15.98■□□□□ 0.15
SNRNP40-203ENST00000463988 WNT7AO00755 349 aa15.98■□□□□ 0.15
SNRNP40-203ENST00000463988 INPPL1O15357 1258 aa15.98■□□□□ 0.15
SNRNP40-203ENST00000463988 RARRES1P49788 294 aa15.98■□□□□ 0.15
SNRNP40-203ENST00000463988 ITIH3Q06033 890 aa15.98■□□□□ 0.15
SNRNP40-203ENST00000463988 LLGL2Q6P1M3 1020 aa15.98■□□□□ 0.15
SNRNP40-203ENST00000463988 NOTUMQ6P988 496 aa15.98■□□□□ 0.15
SNRNP40-203ENST00000463988 TMEM173Q86WV6 379 aaPredicted RBP15.98■□□□□ 0.15
SNRNP40-203ENST00000463988 TMEM175Q9BSA9 504 aa15.98■□□□□ 0.15
SNRNP40-203ENST00000463988 TECTAO75443 2155 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 TSPAN1O60635 241 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 ALDH2P05091 517 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 SLC11A1P49279 550 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 FOSBP53539 338 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 ZNF280BQ86YH2 543 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 SMG8Q8ND04 991 aaKnown RBP15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 ASAP3Q8TDY4 903 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 C8orf76Q96K31 380 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 RPGRIP1Q96KN7 1286 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 ZSCAN31Q96LW9 406 aaPredicted RBP15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 CCDC43Q96MW1 224 aaKnown RBP15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 NECTIN4Q96NY8 510 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 FAM193BQ96PV7 902 aaPredicted RBP15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 KCNH6Q9H252 994 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 TMEM60Q9H2L4 133 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 ADAM7Q9H2U9 754 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 FOXP1Q9H334 677 aaPredicted RBP15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 TUFT1Q9NNX1 390 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 DZANK1Q9NVP4 752 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 DNAJB4Q9UDY4 337 aa15.97■□□□□ 0.15
SNRNP40-203ENST00000463988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 INO80B-WBP1J3KQ70 363 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 B4GALT3O60512 393 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 DDHD2O94830 711 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 SPATA31C1P0DKV0 1188 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 ITGA4P13612 1032 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 GLRA2P23416 452 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 MCM7P33993 719 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 HMGN5P82970 282 aaKnown RBP15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 MBTD1Q05BQ5 628 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 CAPSQ13938 189 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 AMHR2Q16671 573 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 CES5AQ6NT32 575 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 BMP8AQ7Z5Y6 402 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 PPFIBP1Q86W92 1011 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 TMEM87AQ8NBN3 555 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 PIGOQ8TEQ8 1089 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 BCL7CQ8WUZ0 217 aaPredicted RBP15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 MFSD14AQ96MC6 490 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 POLR3CQ9BUI4 534 aaPredicted RBP15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 GBP3Q9H0R5 595 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 CSRNP2Q9H175 543 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 SH2B1Q9NRF2 756 aaPredicted RBP15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 DBR1Q9UK59 544 aaKnown RBP15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 IPPQ9Y573 584 aa15.96■□□□□ 0.15
SNRNP40-203ENST00000463988 ZNF318Q5VUA4 2279 aa15.96■□□□□ 0.14
SNRNP40-203ENST00000463988 POTEMA6NI47 508 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 RBM25P49756 843 aaKnown RBP15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 AFF1P51825 1210 aaKnown RBP15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 ZXDAP98168 799 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 PTPN14Q15678 1187 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 TRIM67Q6ZTA4 783 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 HFE2Q6ZVN8 426 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 CATSPER3Q86XQ3 398 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 CCDC83Q8IWF9 413 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 HACE1Q8IYU2 909 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 MCPH1Q8NEM0 835 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 FBXO18Q8NFZ0 1043 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 ERMNQ8TAM6 284 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 SLC22A17Q8WUG5 538 aa15.95■□□□□ 0.14
SNRNP40-203ENST00000463988 NACC1Q96RE7 527 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms