RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 SKIP12755 728 aa14.36□□□□□ -0.11
XRN1-203ENST00000463916 BMP1P13497 986 aa14.36□□□□□ -0.11
XRN1-203ENST00000463916 RAB27AP51159 221 aa14.36□□□□□ -0.11
XRN1-203ENST00000463916 PCBP1Q15365 356 aaKnown RBP eCLIP14.36□□□□□ -0.11
XRN1-203ENST00000463916 HYIQ5T013 277 aa14.36□□□□□ -0.11
XRN1-203ENST00000463916 DAW1Q8N136 415 aa14.36□□□□□ -0.11
XRN1-203ENST00000463916 LRRC15Q8TF66 581 aa14.36□□□□□ -0.11
XRN1-203ENST00000463916 AAASQ9NRG9 546 aa14.36□□□□□ -0.11
XRN1-203ENST00000463916 INPP5FQ9Y2H2 1132 aa14.36□□□□□ -0.11
XRN1-203ENST00000463916 NT5C1B-RDH14C9J2C7 533 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 LAG3P18627 525 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 ERVFC1P60507 584 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 HYAL1Q12794 435 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 RINT1Q6NUQ1 792 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 NOTUMQ6P988 496 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 ADGRD2Q7Z7M1 963 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 THNSL1Q8IYQ7 743 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 CSRNP2Q9H175 543 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 FZD8Q9H461 694 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 UBE2ZQ9H832 354 aaPredicted RBP14.35□□□□□ -0.11
XRN1-203ENST00000463916 TBC1D13Q9NVG8 400 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 IPPQ9Y573 584 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 BDP1A6H8Y1 2624 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 TCF20Q9UGU0 1960 aaKnown RBP14.35□□□□□ -0.11
XRN1-203ENST00000463916 A0A1B0GUA9 196 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 AXLP30530 894 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 COL19A1Q14993 1142 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 PTPAQ15257 358 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 NOMO2Q5JPE7 1267 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 GLB1LQ6UWU2 654 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 C1orf186Q6ZWK4 172 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 TMEM173Q86WV6 379 aaPredicted RBP14.35□□□□□ -0.11
XRN1-203ENST00000463916 ZNF280BQ86YH2 543 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 CCDC113Q9H0I3 377 aa14.35□□□□□ -0.11
XRN1-203ENST00000463916 STX6O43752 255 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 NCLP19338 710 aaKnown RBP14.34□□□□□ -0.11
XRN1-203ENST00000463916 KCNA5P22460 613 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 LTBRP36941 435 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 NAMPTP43490 491 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 BCAR1P56945 870 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 MAPK7Q13164 816 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 PGBD4Q96DM1 585 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 ZNF558Q96NG5 402 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 NXF3Q9H4D5 531 aaKnown RBP14.34□□□□□ -0.11
XRN1-203ENST00000463916 NRDE2Q9H7Z3 1164 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 DNAJB4Q9UDY4 337 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 SFI1A8K8P3 1242 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 LINC01565O15544 149 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 DDHD2O94830 711 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 PLCB3Q01970 1234 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 CEBPZQ03701 1054 aaKnown RBP14.34□□□□□ -0.11
XRN1-203ENST00000463916 DLX2Q07687 328 aaPredicted RBP14.34□□□□□ -0.11
XRN1-203ENST00000463916 NCBP1Q09161 790 aaKnown RBP14.34□□□□□ -0.11
XRN1-203ENST00000463916 RAD51AP2Q09MP3 1159 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 CTC1Q2NKJ3 1217 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 TMEM119Q4V9L6 283 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 CABP7Q86V35 215 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 SLC39A11Q8N1S5 342 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 KIFAP3Q92845 792 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 NECAB3Q96P71 396 aaPredicted RBP14.34□□□□□ -0.11
XRN1-203ENST00000463916 MRPL9Q9BYD2 267 aaKnown RBP14.34□□□□□ -0.11
XRN1-203ENST00000463916 IGFLR1Q9H665 355 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 RSAD1Q9HA92 442 aa14.34□□□□□ -0.11
XRN1-203ENST00000463916 H3BQ06 376 aaPredicted RBP14.33□□□□□ -0.12
XRN1-203ENST00000463916 HIP1RO75146 1068 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 ZC3H11AO75152 810 aaKnown RBP eCLIP14.33□□□□□ -0.12
XRN1-203ENST00000463916 POMCP01189 267 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 LIG1P18858 919 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 MARCKSP29966 332 aaPredicted RBP14.33□□□□□ -0.12
XRN1-203ENST00000463916 SLC12A3P55017 1021 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 UBE3AQ05086 875 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 FAM187BQ17R55 369 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 CSPP1Q1MSJ5 1256 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 SPECC1Q5M775 1068 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 USP49Q70CQ1 688 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 RBM23Q86U06 439 aaKnown RBP14.33□□□□□ -0.12
XRN1-203ENST00000463916 ZBTB8OSQ8IWT0 167 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 SYT2Q8N9I0 419 aaPredicted RBP14.33□□□□□ -0.12
XRN1-203ENST00000463916 DEPTORQ8TB45 409 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 BCL7CQ8WUZ0 217 aaPredicted RBP14.33□□□□□ -0.12
XRN1-203ENST00000463916 PABPC5Q96DU9 382 aaKnown RBP14.33□□□□□ -0.12
XRN1-203ENST00000463916 CCDC51Q96ER9 411 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 AK8Q96MA6 479 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 ZFP42Q96MM3 310 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 TLR9Q9NR96 1032 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 PRMT7Q9NVM4 692 aaPredicted RBP14.33□□□□□ -0.12
XRN1-203ENST00000463916 MIOSQ9NXC5 875 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 SPG21Q9NZD8 308 aa14.33□□□□□ -0.12
XRN1-203ENST00000463916 NPTXRO95502 500 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 BMP15O95972 392 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 SSBP05455 408 aaKnown RBP eCLIP14.32□□□□□ -0.12
XRN1-203ENST00000463916 ITGA4P13612 1032 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 AKAP5P24588 427 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 NPTX2P47972 431 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 ALDH7A1P49419 539 aaKnown RBP14.32□□□□□ -0.12
XRN1-203ENST00000463916 PEX3P56589 373 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 AAK1Q2M2I8 961 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 ARSHQ5FYA8 562 aa14.32□□□□□ -0.12
XRN1-203ENST00000463916 SLC27A1Q6PCB7 646 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms