RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 AGMOQ6ZNB7 445 aa16.25■□□□□ 0.19
SMC1A-204ENST00000463684 RUBCNQ92622 972 aa16.25■□□□□ 0.19
SMC1A-204ENST00000463684 SLC5A5Q92911 643 aa16.25■□□□□ 0.19
SMC1A-204ENST00000463684 NLRP4Q96MN2 994 aa16.25■□□□□ 0.19
SMC1A-204ENST00000463684 RPS6KC1Q96S38 1066 aa16.25■□□□□ 0.19
SMC1A-204ENST00000463684 JPH2Q9BR39 696 aaPredicted RBP16.25■□□□□ 0.19
SMC1A-204ENST00000463684 RHOBTB2Q9BYZ6 727 aa16.25■□□□□ 0.19
SMC1A-204ENST00000463684 RSAD1Q9HA92 442 aa16.25■□□□□ 0.19
SMC1A-204ENST00000463684 PIDD1Q9HB75 910 aa16.25■□□□□ 0.19
SMC1A-204ENST00000463684 CNTNAP2Q9UHC6 1331 aa16.24■□□□□ 0.19
SMC1A-204ENST00000463684 MYH9P35579 1960 aaKnown RBP16.24■□□□□ 0.19
SMC1A-204ENST00000463684 B4GALT3O60512 393 aa16.24■□□□□ 0.19
SMC1A-204ENST00000463684 MAFO75444 373 aaPredicted RBP16.24■□□□□ 0.19
SMC1A-204ENST00000463684 POMCP01189 267 aa16.24■□□□□ 0.19
SMC1A-204ENST00000463684 DCNP07585 359 aaKnown RBP16.24■□□□□ 0.19
SMC1A-204ENST00000463684 SP9P0CG40 484 aa16.24■□□□□ 0.19
SMC1A-204ENST00000463684 MRPL10Q7Z7H8 261 aaKnown RBP16.24■□□□□ 0.19
SMC1A-204ENST00000463684 KSR1Q8IVT5 923 aa16.24■□□□□ 0.19
SMC1A-204ENST00000463684 C1orf210Q8IVY1 113 aa16.24■□□□□ 0.19
SMC1A-204ENST00000463684 GPR152Q8TDT2 470 aa16.24■□□□□ 0.19
SMC1A-204ENST00000463684 SMG7Q92540 1137 aaKnown RBP16.24■□□□□ 0.19
SMC1A-204ENST00000463684 MYADMQ96S97 322 aa16.24■□□□□ 0.19
SMC1A-204ENST00000463684 CEP89Q96ST8 783 aa16.24■□□□□ 0.19
SMC1A-204ENST00000463684 SH2D3AQ9BRG2 576 aa16.24■□□□□ 0.19
SMC1A-204ENST00000463684 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.24■□□□□ 0.19
SMC1A-204ENST00000463684 WDR87Q6ZQQ6 2873 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 TMEM150BA6NC51 233 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 TEX28O15482 410 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 PRPF3O43395 683 aaKnown RBP16.23■□□□□ 0.19
SMC1A-204ENST00000463684 MYBP10242 640 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 KRT32Q14532 448 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 CCDC148Q8NFR7 591 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 HDAC7Q8WUI4 952 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 HERC2P3Q9BVR0 1158 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 UBN1Q9NPG3 1134 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 ARHGEF3Q9NR81 526 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 AGPAT5Q9NUQ2 364 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 GVINP1Q7Z2Y8 2422 aa16.23■□□□□ 0.19
SMC1A-204ENST00000463684 NR1I2O75469 434 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 RFPL2O75678 378 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 PSMD10O75832 226 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 STBD1O95210 358 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 HMGB1P09429 215 aaKnown RBP16.22■□□□□ 0.19
SMC1A-204ENST00000463684 OR1G1P47890 313 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 GLUD2P49448 558 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 AFF1P51825 1210 aaKnown RBP16.22■□□□□ 0.19
SMC1A-204ENST00000463684 DCLRE1AQ6PJP8 1040 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 TAS1R1Q7RTX1 841 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 CNNM3Q8NE01 707 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 GJA10Q969M2 543 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 SHDQ96IW2 340 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 PLEKHA4Q9H4M7 779 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 IFT122Q9HBG6 1241 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 PRG3Q9Y2Y8 225 aaPredicted RBP16.22■□□□□ 0.19
SMC1A-204ENST00000463684 DENND4AQ7Z401 1863 aa16.22■□□□□ 0.19
SMC1A-204ENST00000463684 DMXL1Q9Y485 3027 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 GAS2O43903 313 aaKnown RBP16.21■□□□□ 0.19
SMC1A-204ENST00000463684 SPATA31D3P0C874 917 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 LAMP2P13473 410 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 ADCK5Q3MIX3 580 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 TSGA10IPQ3SY00 556 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 KIAA0319Q5VV43 1072 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 SPATA31D4Q6ZUB0 917 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 SRGAP1Q7Z6B7 1085 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 EXOC8Q8IYI6 725 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 SLC7A3Q8WY07 619 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 PHKBQ93100 1093 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 BORCS6Q96GS4 357 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 NT5C3AQ9H0P0 336 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 RXFP1Q9HBX9 757 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 DLL3Q9NYJ7 618 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 DLGAP2Q9P1A6 1054 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 COL4A3BPQ9Y5P4 624 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 ZNF292O60281 2723 aa16.21■□□□□ 0.19
SMC1A-204ENST00000463684 EDIL3O43854 480 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 KINO60870 393 aaKnown RBP16.2■□□□□ 0.18
SMC1A-204ENST00000463684 C1RP00736 705 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 SRGAP2CP0DJJ0 459 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 ITGA4P13612 1032 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 NCLP19338 710 aaKnown RBP16.2■□□□□ 0.18
SMC1A-204ENST00000463684 PSMC5P62195 406 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 Q4G0T1 1027 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 GET4Q7L5D6 327 aaPredicted RBP16.2■□□□□ 0.18
SMC1A-204ENST00000463684 PALB2Q86YC2 1186 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 COLGALT2Q8IYK4 626 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 DCLK2Q8N568 766 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 TBCKQ8TEA7 893 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 ZNF707Q96C28 371 aaPredicted RBP16.2■□□□□ 0.18
SMC1A-204ENST00000463684 C22orf23Q9BZE7 217 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 SLC2A4RGQ9NR83 387 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 MARCH5Q9NX47 278 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 ZDHHC7Q9NXF8 308 aa16.2■□□□□ 0.18
SMC1A-204ENST00000463684 ANHXE9PGG2 379 aa16.19■□□□□ 0.18
SMC1A-204ENST00000463684 HOXA11P31270 313 aaPredicted RBP16.19■□□□□ 0.18
SMC1A-204ENST00000463684 NLRP5P59047 1200 aa16.19■□□□□ 0.18
SMC1A-204ENST00000463684 DSG1Q02413 1049 aa16.19■□□□□ 0.18
SMC1A-204ENST00000463684 UBXN11Q5T124 520 aa16.19■□□□□ 0.18
SMC1A-204ENST00000463684 ANO5Q75V66 913 aa16.19■□□□□ 0.18
SMC1A-204ENST00000463684 RASEFQ8IZ41 740 aa16.19■□□□□ 0.18
SMC1A-204ENST00000463684 PJA1Q8NG27 643 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms