RNA–Protein interactions for RNA: ENST00000463144.5

MSH5-211, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,296 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-211ENST00000463144 OGFRQ9NZT2 677 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 ARHGAP28Q9P2N2 729 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 RAB21Q9UL25 225 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 USP20Q9Y2K6 914 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 BTNL10A8MVZ5 291 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 P4HA2O15460 535 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 PALMO75781 387 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 ARIH2O95376 493 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 TUBB4BP68371 445 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 EMC2Q15006 297 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 ARHGAP44Q17R89 818 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 LY6KQ17RY6 165 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 C10orf76Q5T2E6 689 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 TMCO3Q6UWJ1 677 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 PARD3BQ8TEW8 1205 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 TMEM143Q96AN5 459 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 FBXL18Q96ME1 805 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 OSBPL9Q96SU4 736 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 POP1Q99575 1024 aaKnown RBP11.05□□□□□ -0.64
MSH5-211ENST00000463144 NIFKQ9BYG3 293 aaKnown RBP11.05□□□□□ -0.64
MSH5-211ENST00000463144 DHX33Q9H6R0 707 aaKnown RBP11.05□□□□□ -0.64
MSH5-211ENST00000463144 PCDHGC5Q9Y5F6 944 aa11.05□□□□□ -0.64
MSH5-211ENST00000463144 ZNFX1Q9P2E3 1918 aaKnown RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 DNAJC25-GNG10A0A024R161 153 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 SLC25A27O95847 323 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 ANXA13P27216 316 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 CXCR5P32302 372 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 NAP1L1P55209 391 aaKnown RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 LDLRAD1Q5T700 205 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.04□□□□□ -0.64
MSH5-211ENST00000463144 ASAP3Q8TDY4 903 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 SEMA4DQ92854 862 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 MFSD14AQ96MC6 490 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 PSMB7Q99436 277 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 TAF1DQ9H5J8 278 aaPredicted RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 UBE2TQ9NPD8 197 aaPredicted RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 GRID2IPA4D2P6 1211 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 GLTPD2A6NH11 291 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 LRRIQ3A6PVS8 624 aaPredicted RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 PMM2O15305 246 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 N4BP1O75113 896 aaKnown RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 GLRA2P23416 452 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 POLGP54098 1239 aaPredicted RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 BMS1Q14692 1282 aaKnown RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 TARBP2Q15633 366 aaKnown RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 EAPPQ56P03 285 aaPredicted RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 BRDTQ58F21 947 aaPredicted RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 U2AF1L4Q8WU68 220 aaKnown RBP11.04□□□□□ -0.64
MSH5-211ENST00000463144 KAT5Q92993 513 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 CCDC127Q96BQ5 260 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 IFT74Q96LB3 600 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 EHD2Q9NZN4 543 aa11.04□□□□□ -0.64
MSH5-211ENST00000463144 SIP14410 1827 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 GGPS1O95749 300 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 TBC1D8O95759 1140 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 FTCDO95954 541 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 TGFB3P10600 412 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 ARL2P36404 184 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 MXI1P50539 228 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 VSNL1P62760 191 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 MAP2K1Q02750 393 aaPredicted RBP11.03□□□□□ -0.64
MSH5-211ENST00000463144 CKAP4Q07065 602 aaKnown RBP11.03□□□□□ -0.64
MSH5-211ENST00000463144 NEDD9Q14511 834 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 KIF22Q14807 665 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 FASTKD5Q7L8L6 764 aaKnown RBP11.03□□□□□ -0.64
MSH5-211ENST00000463144 ZNF572Q7Z3I7 529 aaPredicted RBP11.03□□□□□ -0.64
MSH5-211ENST00000463144 GLYCTKQ8IVS8 523 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 POMGNT1Q8WZA1 660 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 PORCNQ9H237 461 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 TOPORSQ9NS56 1045 aaPredicted RBP11.03□□□□□ -0.64
MSH5-211ENST00000463144 SMARCAL1Q9NZC9 954 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 DAAM1Q9Y4D1 1078 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 HYOU1Q9Y4L1 999 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 MCM3APO60318 1980 aa11.03□□□□□ -0.64
MSH5-211ENST00000463144 CCDC151A5D8V7 595 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 SASH3O75995 380 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 TCP1P17987 556 aaKnown RBP11.02□□□□□ -0.64
MSH5-211ENST00000463144 OSBPP22059 807 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 STAT5BP51692 787 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 CYP24A1Q07973 514 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 C2orf54Q08AI8 447 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 BRD3Q15059 726 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 TMEM63BQ5T3F8 832 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 MEI1Q5TIA1 1274 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 METTL7BQ6UX53 244 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 ARMC9Q7Z3E5 817 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 TMC2Q8TDI7 906 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 SEPT1Q8WYJ6 367 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 HAPLN2Q9GZV7 340 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.02□□□□□ -0.649e-7■■■■■ 47
MSH5-211ENST00000463144 COQ4Q9Y3A0 265 aa11.02□□□□□ -0.64
MSH5-211ENST00000463144 HNRNPDLO14979 420 aaKnown RBP11.02□□□□□ -0.65
MSH5-211ENST00000463144 GRIN3BO60391 1043 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 EDN1P05305 212 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 H2AFZP0C0S5 128 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 POTEJP0CG39 1038 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 GARTP22102 1010 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 RFX1P22670 979 aa11.02□□□□□ -0.65
MSH5-211ENST00000463144 TCF7P36402 384 aaPredicted RBP11.02□□□□□ -0.65
MSH5-211ENST00000463144 GALCP54803 685 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms