RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 RFPL2O75678 378 aa17.6■□□□□ 0.41
SND1-203ENST00000463020 CFHP08603 1231 aa17.6■□□□□ 0.41
SND1-203ENST00000463020 USP11P51784 963 aa17.6■□□□□ 0.41
SND1-203ENST00000463020 CCT2P78371 535 aaKnown RBP17.6■□□□□ 0.41
SND1-203ENST00000463020 LETM2Q2VYF4 491 aa17.6■□□□□ 0.41
SND1-203ENST00000463020 ZNF410Q86VK4 478 aa17.6■□□□□ 0.41
SND1-203ENST00000463020 DTWD2Q8NBA8 298 aa17.6■□□□□ 0.41
SND1-203ENST00000463020 TMEM87AQ8NBN3 555 aa17.6■□□□□ 0.41
SND1-203ENST00000463020 RNF39Q9H2S5 420 aa17.6■□□□□ 0.41
SND1-203ENST00000463020 MAN1C1Q9NR34 630 aa17.6■□□□□ 0.41
SND1-203ENST00000463020 CCDC196A0A1B0GTZ2 297 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 EFEMP2O95967 443 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 SPATA31D3P0C874 917 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 FGD1P98174 961 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 GIT2Q14161 759 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 KRT32Q14532 448 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 SPATA31D4Q6ZUB0 917 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 OTOP3Q7RTS5 596 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 MRPL10Q7Z7H8 261 aaKnown RBP17.59■□□□□ 0.41
SND1-203ENST00000463020 SMG8Q8ND04 991 aaKnown RBP17.59■□□□□ 0.41
SND1-203ENST00000463020 TMEM143Q96AN5 459 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 B3GALT6Q96L58 329 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 MBOAT7Q96N66 472 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 MYADMQ96S97 322 aa17.59■□□□□ 0.41
SND1-203ENST00000463020 RNF26Q9BY78 433 aaPredicted RBP17.59■□□□□ 0.41
SND1-203ENST00000463020 PRG3Q9Y2Y8 225 aaPredicted RBP17.59■□□□□ 0.41
SND1-203ENST00000463020 CYP3A7-CYP3A51PA0A087WV96 503 aa17.58■□□□□ 0.4
SND1-203ENST00000463020 TEX28O15482 410 aa17.58■□□□□ 0.4
SND1-203ENST00000463020 IFNAR1P17181 557 aa17.58■□□□□ 0.4
SND1-203ENST00000463020 CYP3A7P24462 503 aa17.58■□□□□ 0.4
SND1-203ENST00000463020 PDIA3P30101 505 aaKnown RBP17.58■□□□□ 0.4
SND1-203ENST00000463020 BMS1Q14692 1282 aaKnown RBP17.58■□□□□ 0.4
SND1-203ENST00000463020 RNF168Q8IYW5 571 aaPredicted RBP17.58■□□□□ 0.4
SND1-203ENST00000463020 BICD2Q8TD16 824 aa17.58■□□□□ 0.4
SND1-203ENST00000463020 ZNF707Q96C28 371 aaPredicted RBP17.58■□□□□ 0.4
SND1-203ENST00000463020 ACSF2Q96CM8 615 aaPredicted RBP17.58■□□□□ 0.4
SND1-203ENST00000463020 EIF2AQ9BY44 585 aaKnown RBP17.58■□□□□ 0.4
SND1-203ENST00000463020 AGXT2Q9BYV1 514 aa17.58■□□□□ 0.4
SND1-203ENST00000463020 RSAD1Q9HA92 442 aa17.58■□□□□ 0.4
SND1-203ENST00000463020 MIOSQ9NXC5 875 aa17.58■□□□□ 0.4
SND1-203ENST00000463020 FBXL21Q9UKT6 434 aa17.58■□□□□ 0.4
SND1-203ENST00000463020 VAV3Q9UKW4 847 aa17.58■□□□□ 0.4
SND1-203ENST00000463020 R4GN57 208 aa17.58■□□□□ 0.4
SND1-203ENST00000463020 SPDYE4A6NLX3 237 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 ZBTB39O15060 712 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 HMGB1P09429 215 aaKnown RBP17.57■□□□□ 0.4
SND1-203ENST00000463020 SRGAP2CP0DJJ0 459 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 RPS6KB1P23443 525 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 ID4P47928 161 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 RAB27AP51159 221 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 NLRP5P59047 1200 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 PPFIBP1Q86W92 1011 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 COLGALT2Q8IYK4 626 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 CCDC148Q8NFR7 591 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 RDM1Q8NG50 284 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 PRPF31Q8WWY3 499 aaKnown RBP17.57■□□□□ 0.4
SND1-203ENST00000463020 RIN2Q8WYP3 895 aaPredicted RBP17.57■□□□□ 0.4
SND1-203ENST00000463020 LARP6Q9BRS8 491 aaKnown RBP17.57■□□□□ 0.4
SND1-203ENST00000463020 HERC2P3Q9BVR0 1158 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 EMILIN2Q9BXX0 1053 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 CA14Q9ULX7 337 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 FAN1Q9Y2M0 1017 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 HES2Q9Y543 173 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 COL4A3BPQ9Y5P4 624 aa17.57■□□□□ 0.4
SND1-203ENST00000463020 CCDC195A0A1B0GUA6 201 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 SOD2P04179 222 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 SKIP12755 728 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 ANP32AP39687 249 aaKnown RBP17.56■□□□□ 0.4
SND1-203ENST00000463020 DNM2P50570 870 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 AK2P54819 239 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 FOXK2Q01167 660 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 KIAA0319Q5VV43 1072 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 C15orf39Q6ZRI6 1047 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 URGCPQ8TCY9 931 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 ZFP42Q96MM3 310 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 RPS6KC1Q96S38 1066 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 MRPL17Q9NRX2 175 aaKnown RBP17.56■□□□□ 0.4
SND1-203ENST00000463020 CACNG4Q9UBN1 327 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 PCDHA4Q9UN74 947 aa17.56■□□□□ 0.4
SND1-203ENST00000463020 NCOR2Q9Y618 2525 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 CLUHO75153 1309 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 INPPL1O15357 1258 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 CDC45O75419 566 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 GBP2P32456 591 aaPredicted RBP17.55■□□□□ 0.4
SND1-203ENST00000463020 HSPA4P34932 840 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 PSMC5P62195 406 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 CDC42EP1Q00587 391 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 AKAP17AQ02040 695 aaKnown RBP17.55■□□□□ 0.4
SND1-203ENST00000463020 LAMTOR4Q0VGL1 99 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 TOB2Q14106 344 aaPredicted RBP17.55■□□□□ 0.4
SND1-203ENST00000463020 INF2Q27J81 1249 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 BLOC1S2Q6QNY1 142 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 FBXL16Q8N461 479 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 SLC44A3Q8N4M1 653 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 CMASQ8NFW8 434 aaPredicted RBP17.55■□□□□ 0.4
SND1-203ENST00000463020 RABGGTAQ92696 567 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 RMDN1Q96DB5 314 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 PGBD4Q96DM1 585 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 TMEM175Q9BSA9 504 aa17.55■□□□□ 0.4
SND1-203ENST00000463020 INO80BQ9C086 356 aaPredicted RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms