RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 YBX3P16989 372 aaKnown RBP eCLIP8.71□□□□□ -1.02
UBE4B-204ENST00000462658 ALDH1B1P30837 517 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 MCAMP43121 646 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 GUCY1A3Q02108 690 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 KIZQ2M2Z5 673 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 CAVIN4Q5BKX8 364 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 TRIM61Q5EBN2 209 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 BRAPQ7Z569 592 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 FGD2Q7Z6J4 655 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 GSTCDQ8NEC7 633 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 SCLYQ96I15 445 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 KCNJ15Q99712 375 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 IPPKQ9H8X2 491 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 DBR1Q9UK59 544 aaKnown RBP8.71□□□□□ -1.02
UBE4B-204ENST00000462658 RNF114Q9Y508 228 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 CD2APQ9Y5K6 639 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 CHD4Q14839 1912 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 C10orf71Q711Q0 1435 aa8.71□□□□□ -1.02
UBE4B-204ENST00000462658 MYOCOSA0A1B0GUC4 107 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 EPB41L2O43491 1005 aaKnown RBP8.7□□□□□ -1.02
UBE4B-204ENST00000462658 GRK2P25098 689 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 VIPR1P32241 457 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 GRK3P35626 688 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 GYG1P46976 350 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 TTF1Q15361 905 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-204ENST00000462658 SDE2Q6IQ49 451 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 SPATA5Q8NB90 893 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 MASTLQ96GX5 879 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 FAM84BQ96KN1 310 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-204ENST00000462658 FAM227BQ96M60 508 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 IL25Q9H293 177 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 BCAS3Q9H6U6 928 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 GNL3LQ9NVN8 582 aaKnown RBP8.7□□□□□ -1.02
UBE4B-204ENST00000462658 HMG20BQ9P0W2 317 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 PLA2G2DQ9UNK4 145 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 COA3Q9Y2R0 106 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-204ENST00000462658 COL11A2P13942 1736 aaPredicted RBP8.7□□□□□ -1.02
UBE4B-204ENST00000462658 ZNF804BA4D1E1 1349 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 XDHP47989 1333 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 RFX7Q2KHR2 1363 aa8.7□□□□□ -1.02
UBE4B-204ENST00000462658 TAF1P21675 1872 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 A0A0D9SFI3 127 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 H0YIN7 160 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 RNF113AO15541 343 aaKnown RBP8.69□□□□□ -1.02
UBE4B-204ENST00000462658 SRGAP2CP0DJJ0 459 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 YBX1P67809 324 aaKnown RBP8.69□□□□□ -1.02
UBE4B-204ENST00000462658 GPSM2P81274 684 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 NR1I3Q14994 352 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 PLEKHN1Q494U1 663 aaPredicted RBP8.69□□□□□ -1.02
UBE4B-204ENST00000462658 MROH9Q5TGP6 573 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 C16orf86Q6ZW13 317 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 TMC6Q7Z403 805 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 C2CD5Q86YS7 1000 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 SP8Q8IXZ3 490 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 NETO2Q8NC67 525 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 ZNF622Q969S3 477 aaKnown RBP eCLIP8.69□□□□□ -1.024e-7■■■□□ 17.2
UBE4B-204ENST00000462658 ALG1Q9BT22 464 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 MCOLN1Q9GZU1 580 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 LSG1Q9H089 658 aaKnown RBP8.69□□□□□ -1.02
UBE4B-204ENST00000462658 TRIM39Q9HCM9 518 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 RAD50Q92878 1312 aa8.69□□□□□ -1.02
UBE4B-204ENST00000462658 DLEC1Q9Y238 1755 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 SPEF2Q9C093 1822 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 ENPP3O14638 875 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 EFCAB14O75071 495 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 CHGBP05060 677 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 ZFYP08048 801 aaPredicted RBP8.68□□□□□ -1.02
UBE4B-204ENST00000462658 MCCP23508 829 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 KLRK1P26718 216 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 HIBADHP31937 336 aaKnown RBP8.68□□□□□ -1.02
UBE4B-204ENST00000462658 MAPKAPK2P49137 400 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 SRSF3P84103 164 aaKnown RBP8.68□□□□□ -1.02
UBE4B-204ENST00000462658 PRR5P85299 388 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 PABPC4Q13310 644 aaKnown RBP eCLIP8.68□□□□□ -1.02
UBE4B-204ENST00000462658 TCEA2Q15560 299 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 MCMDC2Q4G0Z9 681 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 FNDC3BQ53EP0 1204 aaKnown RBP8.68□□□□□ -1.02
UBE4B-204ENST00000462658 ZSCAN25Q6NSZ9 544 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 RIOX2Q8IUF8 465 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 SGPP1Q9BX95 441 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.68□□□□□ -1.02
UBE4B-204ENST00000462658 TMX4Q9H1E5 349 aaPredicted RBP8.68□□□□□ -1.02
UBE4B-204ENST00000462658 PIH1D3Q9NQM4 214 aaKnown RBP8.68□□□□□ -1.02
UBE4B-204ENST00000462658 HELLSQ9NRZ9 838 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 ATP6V0A2Q9Y487 856 aa8.68□□□□□ -1.02
UBE4B-204ENST00000462658 FRAT2O75474 233 aaPredicted RBP8.67□□□□□ -1.02
UBE4B-204ENST00000462658 IDH1O75874 414 aaKnown RBP8.67□□□□□ -1.02
UBE4B-204ENST00000462658 UFL1O94874 794 aa8.67□□□□□ -1.02
UBE4B-204ENST00000462658 COL6A2P12110 1019 aa8.67□□□□□ -1.02
UBE4B-204ENST00000462658 KCNA3P22001 575 aa8.67□□□□□ -1.02
UBE4B-204ENST00000462658 POLD1P28340 1107 aa8.67□□□□□ -1.02
UBE4B-204ENST00000462658 CHRNA5P30532 468 aa8.67□□□□□ -1.02
UBE4B-204ENST00000462658 PTH1RQ03431 593 aa8.67□□□□□ -1.02
UBE4B-204ENST00000462658 PAK1Q13153 545 aa8.67□□□□□ -1.02
UBE4B-204ENST00000462658 ZC3H14Q6PJT7 736 aaKnown RBP8.67□□□□□ -1.02
UBE4B-204ENST00000462658 C15orf52Q6ZUT6 534 aaKnown RBP8.67□□□□□ -1.02
UBE4B-204ENST00000462658 PCDH19Q8TAB3 1148 aa8.67□□□□□ -1.02
UBE4B-204ENST00000462658 MAGEB10Q96LZ2 347 aaPredicted RBP8.67□□□□□ -1.02
UBE4B-204ENST00000462658 SEC62Q99442 399 aaKnown RBP8.67□□□□□ -1.02
UBE4B-204ENST00000462658 EPB41L1Q9H4G0 881 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms