RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 DPF2Q92785 391 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 SCYL1Q96KG9 808 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 NYXQ9GZU5 481 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 GBA2Q9HCG7 927 aaPredicted RBP6.25□□□□□ -1.41
COPS3-204ENST00000462236 KLHL14Q9P2G3 628 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 DBR1Q9UK59 544 aaKnown RBP6.25□□□□□ -1.41
COPS3-204ENST00000462236 NOP58Q9Y2X3 529 aaKnown RBP6.25□□□□□ -1.41
COPS3-204ENST00000462236 ATP6V0A2Q9Y487 856 aa6.25□□□□□ -1.41
COPS3-204ENST00000462236 BTBD11A6QL63 1104 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 SGSM2O43147 1006 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 CLASP2O75122 1294 aaKnown RBP6.24□□□□□ -1.41
COPS3-204ENST00000462236 GJA4P35212 333 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 SCNN1BP51168 640 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 SLC10A5Q5PT55 438 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 PKN3Q6P5Z2 889 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 ZC3H14Q6PJT7 736 aaKnown RBP6.24□□□□□ -1.41
COPS3-204ENST00000462236 EP400NLQ6ZTU2 488 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 OSTM1Q86WC4 334 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 RASAL3Q86YV0 1011 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 ZNF34Q8IZ26 560 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 C2orf69Q8N8R5 385 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 RBM17Q96I25 401 aaKnown RBP6.24□□□□□ -1.41
COPS3-204ENST00000462236 BOCQ9BWV1 1114 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 NGRNQ9NPE2 291 aaKnown RBP6.24□□□□□ -1.41
COPS3-204ENST00000462236 HSPBP1Q9NZL4 362 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 MYOTQ9UBF9 498 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 ASH2LQ9UBL3 628 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 CNOT7Q9UIV1 285 aaKnown RBP6.24□□□□□ -1.41
COPS3-204ENST00000462236 PALD1Q9ULE6 856 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 SRPK3Q9UPE1 567 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 ZKSCAN5Q9Y2L8 839 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 PCDHB4Q9Y5E5 795 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 COL4A3BPQ9Y5P4 624 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 ALPK3Q96L96 1907 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 MAP3K15Q6ZN16 1313 aa6.24□□□□□ -1.41
COPS3-204ENST00000462236 SLC12A8A0AV02 714 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 ZC3H12DA2A288 527 aaKnown RBP6.23□□□□□ -1.41
COPS3-204ENST00000462236 ZNF503-AS2A6NEH8 195 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 NUDT19A8MXV4 375 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.23□□□□□ -1.41
COPS3-204ENST00000462236 NKRFO15226 690 aaKnown RBP eCLIP6.23□□□□□ -1.41
COPS3-204ENST00000462236 ZEB2O60315 1214 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 BRINP1O60477 761 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 KPNA6O60684 536 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 GAS7O60861 476 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 AMY2AP04746 511 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 AMY2BP19961 511 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 CNGA1P29973 690 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 GALK1P51570 392 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 OCRLQ01968 901 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 DSG1Q02413 1049 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 SART3Q15020 963 aaKnown RBP6.23□□□□□ -1.41
COPS3-204ENST00000462236 TNIP1Q15025 636 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 PCBP1Q15365 356 aaKnown RBP eCLIP6.23□□□□□ -1.41
COPS3-204ENST00000462236 PLEKHN1Q494U1 663 aaPredicted RBP6.23□□□□□ -1.41
COPS3-204ENST00000462236 SUSD4Q5VX71 490 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 FBXO46Q6PJ61 603 aaPredicted RBP6.23□□□□□ -1.41
COPS3-204ENST00000462236 MPZL3Q6UWV2 235 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 KCTD1Q719H9 257 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 SP8Q8IXZ3 490 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 AFAP1L2Q8N4X5 818 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 SUPT20HQ8NEM7 779 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 LEO1Q8WVC0 666 aaPredicted RBP6.23□□□□□ -1.41
COPS3-204ENST00000462236 PHACTR3Q96KR7 559 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.23□□□□□ -1.41
COPS3-204ENST00000462236 SMURF1Q9HCE7 757 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 PCDH12Q9NPG4 1184 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 MCM8Q9UJA3 840 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 OTOFQ9HC10 1997 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 ABCC4O15439 1325 aa6.23□□□□□ -1.41
COPS3-204ENST00000462236 RTL9Q8NET4 1388 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 UNC80Q8N2C7 3258 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 TCRBV5S2A0A599 114 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 TCRBV5S4A2TA0A5A2 114 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 MAN2B1O00754 1011 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 RAD17O75943 681 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 COL6A2P12110 1019 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 TM4SF4P48230 202 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 JAM2P57087 298 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 PRR5P85299 388 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 TTLL7Q6ZT98 887 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 MILR1Q7Z6M3 343 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.22□□□□□ -1.41
COPS3-204ENST00000462236 MIB1Q86YT6 1006 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 CPA5Q8WXQ8 436 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 RPGRQ92834 1020 aaKnown RBP6.22□□□□□ -1.41
COPS3-204ENST00000462236 KRTAP4-8Q9BYQ9 185 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 RNF38Q9H0F5 515 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 PCDH18Q9HCL0 1135 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 KNSTRNQ9Y448 316 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 ATP23Q9Y6H3 246 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 MYO9BQ13459 2157 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 SPEF2Q9C093 1822 aa6.22□□□□□ -1.41
COPS3-204ENST00000462236 ZSWIM8A7E2V4 1837 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 VCANP13611 3396 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 PTPDC1A2A3K4 754 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 ADM5C9JUS6 153 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 H7C1D1 291 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 PSMD14O00487 310 aa6.21□□□□□ -1.42
COPS3-204ENST00000462236 BBOX1O75936 387 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms