RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 CCDC136Q96JN2 1154 aa12.19□□□□□ -0.46
CBX3-205ENST00000462165 MRPL17Q9NRX2 175 aaKnown RBP12.19□□□□□ -0.46
CBX3-205ENST00000462165 AGPAT5Q9NUQ2 364 aa12.19□□□□□ -0.46
CBX3-205ENST00000462165 KANSL3Q9P2N6 904 aa12.19□□□□□ -0.46
CBX3-205ENST00000462165 SUCLA2Q9P2R7 463 aaPredicted RBP12.19□□□□□ -0.46
CBX3-205ENST00000462165 NAP1L2Q9ULW6 460 aaPredicted RBP12.19□□□□□ -0.46
CBX3-205ENST00000462165 KRBA1A5PL33 1030 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 TMEM150BA6NC51 233 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 NRP1O14786 923 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 LMNAP02545 664 aaKnown RBP12.18□□□□□ -0.46
CBX3-205ENST00000462165 SOD2P04179 222 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 SSBP05455 408 aaKnown RBP eCLIP12.18□□□□□ -0.46
CBX3-205ENST00000462165 NONOQ15233 471 aaKnown RBP eCLIP12.18□□□□□ -0.46
CBX3-205ENST00000462165 Q4G0T1 1027 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 MRPL10Q7Z7H8 261 aaKnown RBP12.18□□□□□ -0.46
CBX3-205ENST00000462165 PHKBQ93100 1093 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 GJA10Q969M2 543 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 JPH2Q9BR39 696 aaPredicted RBP12.18□□□□□ -0.46
CBX3-205ENST00000462165 SH2D3AQ9BRG2 576 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 RSAD1Q9HA92 442 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 IFT122Q9HBG6 1241 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 WDR6Q9NNW5 1121 aaKnown RBP12.18□□□□□ -0.46
CBX3-205ENST00000462165 MAN1C1Q9NR34 630 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 FAN1Q9Y2M0 1017 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 PCDHB2Q9Y5E7 798 aa12.18□□□□□ -0.46
CBX3-205ENST00000462165 CNTNAP2Q9UHC6 1331 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 CCDC195A0A1B0GUA6 201 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 PAPLNO95428 1278 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 URODP06132 367 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 ADH1AP07327 375 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 CFHP08603 1231 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 GBP2P32456 591 aaPredicted RBP12.17□□□□□ -0.46
CBX3-205ENST00000462165 AFF1P51825 1210 aaKnown RBP12.17□□□□□ -0.46
CBX3-205ENST00000462165 FGD1P98174 961 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 AKAP17AQ02040 695 aaKnown RBP12.17□□□□□ -0.46
CBX3-205ENST00000462165 NTRK3Q16288 839 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 KSR1Q8IVT5 923 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 STAMQ92783 540 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 NXPE3Q969Y0 559 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 NLRP4Q96MN2 994 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 FAM193BQ96PV7 902 aaPredicted RBP12.17□□□□□ -0.46
CBX3-205ENST00000462165 RPS6KC1Q96S38 1066 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 HERC2P3Q9BVR0 1158 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 RNF26Q9BY78 433 aaPredicted RBP12.17□□□□□ -0.46
CBX3-205ENST00000462165 C22orf23Q9BZE7 217 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 EPS15L1Q9UBC2 864 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 DPP7Q9UHL4 492 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 SSX2IPQ9Y2D8 614 aa12.17□□□□□ -0.46
CBX3-205ENST00000462165 EP300Q09472 2414 aaPredicted RBP12.17□□□□□ -0.46
CBX3-205ENST00000462165 CLUHO75153 1309 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 MIA3Q5JRA6 1907 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 CYP3A7-CYP3A51PA0A087WV96 503 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 DDX11L8A8MPP1 907 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 STK25O00506 426 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 C2CD2LO14523 706 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 INPPL1O15357 1258 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 EFEMP2O95967 443 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 SRFP11831 508 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 CYP3A7P24462 503 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 ELMSAN1Q6PJG2 1045 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 Q6ZUG5 572 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 ANO5Q75V66 913 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 RNF168Q8IYW5 571 aaPredicted RBP12.16□□□□□ -0.46
CBX3-205ENST00000462165 FBXL16Q8N461 479 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 SLC44A3Q8N4M1 653 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 KCNG4Q8TDN1 519 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 TBCKQ8TEA7 893 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 HDAC7Q8WUI4 952 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 RSAD2Q8WXG1 361 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 BRF1Q92994 677 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 RMDN1Q96DB5 314 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 YTHDC1Q96MU7 727 aaKnown RBP12.16□□□□□ -0.46
CBX3-205ENST00000462165 MYADMQ96S97 322 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 RXFP1Q9HBX9 757 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 SH3GLB2Q9NR46 395 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 MARCH5Q9NX47 278 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 VPS54Q9P1Q0 977 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 COL4A3BPQ9Y5P4 624 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 ARID2Q68CP9 1835 aa12.16□□□□□ -0.46
CBX3-205ENST00000462165 TEX28O15482 410 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 RFPL2O75678 378 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 GLUD1P00367 558 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 C1RP00736 705 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 POMCP01189 267 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 CPA1P15085 419 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 IFNAR1P17181 557 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 NCLP19338 710 aaKnown RBP12.15□□□□□ -0.46
CBX3-205ENST00000462165 RFX1P22670 979 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 HOXA11P31270 313 aaPredicted RBP12.15□□□□□ -0.46
CBX3-205ENST00000462165 AK2P54819 239 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 PSMC5P62195 406 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 BMP2KLQ5H9B9 411 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 UBXN11Q5T124 520 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 KIAA0319Q5VV43 1072 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 PLA2G4FQ68DD2 849 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 PHLDB3Q6NSJ2 640 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 MOXD1Q6UVY6 613 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 TAS1R1Q7RTX1 841 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 SRGAP1Q7Z6B7 1085 aa12.15□□□□□ -0.46
CBX3-205ENST00000462165 EXOC8Q8IYI6 725 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms