RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 KIFC3Q9BVG8 833 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TRIM9Q9C026 710 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ZHX3Q9H4I2 956 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TMEM134Q9H6X4 195 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ELAC1Q9H777 363 aaKnown RBP12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 MSRAQ9UJ68 235 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PCDHA11Q9Y5I1 949 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TCHHQ07283 1943 aa12.85□□□□□ -0.35
TRAF3IP1-204ENST00000462122 A0A0U1RQF3 1178 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 FRMD3A2A2Y4 597 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SLC16A4O15374 487 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ACTN4O43707 911 aaKnown RBP12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TLL1O43897 1013 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TRAK2O60296 914 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 MYL1P05976 194 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 MAPTP10636 758 aaKnown RBP12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 ARF4P18085 180 aaPredicted RBP12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 FAM189BP81408 668 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PRPF4BQ13523 1007 aaKnown RBP12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 CLEC17AQ6ZS10 378 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 FAM178BQ8IXR5 827 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 CCDC65Q8IXS2 484 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TMEM161BQ8NDZ6 487 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 RAD9AQ99638 391 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 C7orf25Q9BPX7 421 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PBX4Q9BYU1 374 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 GOLPH3LQ9H4A5 285 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 OLFML3Q9NRN5 406 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TMEM161AQ9NX61 479 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 SERTAD1Q9UHV2 236 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 LRFN2Q9ULH4 789 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 INSL6Q9Y581 213 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 PCDHB7Q9Y5E2 793 aa12.84□□□□□ -0.35
TRAF3IP1-204ENST00000462122 TMEM265A0A087WTH1 108 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 A0A1B0GUA9 196 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 GRXCR1A8MXD5 290 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 RBAK-RBAKDNI3L0D1 243 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 K7ENM7 598 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 N4BP3O15049 544 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 B4GALT5O43286 388 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 HOXA2O43364 376 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 UPP2O95045 317 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 EOMESO95936 686 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 IDEP14735 1019 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 DNAJB2P25686 324 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 HTRA4P83105 476 aaPredicted RBP12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 STRN3Q13033 797 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 LONRF3Q496Y0 759 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 TPRNQ4KMQ1 711 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 GPR153Q6NV75 609 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 SLC27A1Q6PCB7 646 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 HAUS6Q7Z4H7 955 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 ECHDC2Q86YB7 292 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 CRIPAKQ8N1N5 446 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 CNNM3Q8NE01 707 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 RSPH1Q8WYR4 309 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 STAMQ92783 540 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 YME1L1Q96TA2 773 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 MRPL4Q9BYD3 311 aaKnown RBP12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 ST6GALNAC4Q9H4F1 302 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 FAM105AQ9NUU6 356 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 PANK4Q9NVE7 773 aa12.83□□□□□ -0.36
TRAF3IP1-204ENST00000462122 SZT2Q5T011 3432 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 ABCB7O75027 752 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 ZNF623O75123 536 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 ZNF202O95125 648 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 LIG1P18858 919 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 AFMP43652 599 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 RABGGTBP53611 331 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 ASIC1P78348 528 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 FAM160A1Q05DH4 1040 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 ALCAMQ13740 583 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 TMEM132AQ24JP5 1023 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 HERC4Q5GLZ8 1057 aaPredicted RBP12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 ATF7IP2Q5U623 682 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 KANK3Q6NY19 840 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 FAM117BQ6P1L5 589 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 KRBA2Q6ZNG9 492 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 APBB1IPQ7Z5R6 666 aaPredicted RBP12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 TMCO2Q7Z6W1 182 aaPredicted RBP12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 SFR1Q86XK3 245 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 HACE1Q8IYU2 909 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 PGBD4Q96DM1 585 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 PAGE5Q96GU1 130 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 CPB2Q96IY4 423 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 GBP4Q96PP9 640 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 FIZ1Q96SL8 496 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 ADPGKQ9BRR6 497 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 TRIM6Q9C030 488 aaPredicted RBP12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 COL4A6Q14031 1691 aa12.82□□□□□ -0.36
TRAF3IP1-204ENST00000462122 TTC3P53804 2025 aa12.81□□□□□ -0.36
TRAF3IP1-204ENST00000462122 PVALEFA0A1B0GWK0 134 aa12.81□□□□□ -0.36
TRAF3IP1-204ENST00000462122 SOX1O00570 391 aaPredicted RBP12.81□□□□□ -0.36
TRAF3IP1-204ENST00000462122 DGKIO75912 1065 aa12.81□□□□□ -0.36
TRAF3IP1-204ENST00000462122 IBSPP21815 317 aaPredicted RBP12.81□□□□□ -0.36
TRAF3IP1-204ENST00000462122 PBX2P40425 430 aa12.81□□□□□ -0.36
TRAF3IP1-204ENST00000462122 UBE2HP62256 183 aa12.81□□□□□ -0.36
TRAF3IP1-204ENST00000462122 GTF2BQ00403 316 aa12.81□□□□□ -0.36
TRAF3IP1-204ENST00000462122 COASYQ13057 564 aa12.81□□□□□ -0.36
TRAF3IP1-204ENST00000462122 DCAF4L1Q3SXM0 396 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms