RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SLC9A2Q9UBY0 812 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 FBXL5Q9UKA1 691 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 NENFQ9UMX5 172 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 TRAF3IP3Q9Y228 551 aa13.53□□□□□ -0.24
COL4A6-204ENST00000461897 BZW2Q9Y6E2 419 aaKnown RBP13.53□□□□□ -0.24
COL4A6-204ENST00000461897 DNAJC25-GNG10A0A024R161 153 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 A0A087X0T9 212 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 PDHXO00330 501 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 BACH1O14867 736 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 ZEB2O60315 1214 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 SORBS3O60504 671 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 HIP1RO75146 1068 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 GCNT3O95395 438 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 FAM228BP0C875 321 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 ACTR2P61160 394 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 SP4Q02446 784 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 KCNA1Q09470 495 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 KNOP1Q1ED39 458 aaKnown RBP13.52□□□□□ -0.25
COL4A6-204ENST00000461897 PLA2G4FQ68DD2 849 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 SEPT14Q6ZU15 432 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 FRMD5Q7Z6J6 570 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 MYCT1Q8N699 235 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 C2orf69Q8N8R5 385 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 PORCNQ9H237 461 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 SEL1LQ9UBV2 794 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 SLC45A1Q9Y2W3 748 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 MCM3APO60318 1980 aa13.52□□□□□ -0.25
COL4A6-204ENST00000461897 ZMYM2Q9UBW7 1377 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 A0A087WUV0 522 aaPredicted RBP13.51□□□□□ -0.25
COL4A6-204ENST00000461897 SRRM3A6NNA2 597 aaPredicted RBP13.51□□□□□ -0.25
COL4A6-204ENST00000461897 CETN3O15182 167 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 ZNF862O60290 1169 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 NMT1P30419 496 aaKnown RBP13.51□□□□□ -0.25
COL4A6-204ENST00000461897 PRKCIP41743 596 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 MATR3P43243 847 aaKnown RBP eCLIP13.51□□□□□ -0.25
COL4A6-204ENST00000461897 KLHL30Q0D2K2 578 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 ASIC2Q16515 512 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 SPRYD7Q5W111 196 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 CST9Q5W186 159 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 ABHD15Q6UXT9 468 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 ANO5Q75V66 913 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 CCDC60Q8IWA6 550 aaPredicted RBP13.51□□□□□ -0.25
COL4A6-204ENST00000461897 ZNF526Q8TF50 670 aaPredicted RBP13.51□□□□□ -0.25
COL4A6-204ENST00000461897 ARL8AQ96BM9 186 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 MS4A14Q96JA4 679 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 ZIM3Q96PE6 472 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 RUFY1Q96T51 708 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 PSMB7Q99436 277 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 MMP19Q99542 508 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 MROH8Q9H579 483 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 GABBR1Q9UBS5 961 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 TRPM7Q96QT4 1865 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 PLXNB2O15031 1838 aa13.51□□□□□ -0.25
COL4A6-204ENST00000461897 SOCS7O14512 581 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 EIF3DO15371 548 aaKnown RBP eCLIP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 HEXIM1O94992 359 aaKnown RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 STBD1O95210 358 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 ZBTB48P10074 688 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 UBA1P22314 1058 aaKnown RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 CARSP49589 748 aaKnown RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 KCNH2Q12809 1159 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 ADAM9Q13443 819 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 KCTD2Q14681 263 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 KDM7AQ6ZMT4 941 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 CYFIP1Q7L576 1253 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 TRMT1LQ7Z2T5 733 aaKnown RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 IRF2BP2Q7Z5L9 587 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 USP38Q8NB14 1042 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 SHCBP1Q8NEM2 672 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 GTF3C2Q8WUA4 911 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 PBKQ96KB5 322 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 ANKEF1Q9NU02 776 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 IGSF9BQ9UPX0 1349 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 MYH9P35579 1960 aaKnown RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 ITGBL1O95965 494 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 PSAPP07602 524 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 HSPA9P38646 679 aaKnown RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 NPEPPSP55786 919 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 TNNC1P63316 161 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 RAPGEF1Q13905 1077 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 IFI16Q16666 785 aaKnown RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 KIAA0753Q2KHM9 967 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 ZC2HC1CQ53FD0 456 aaPredicted RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 ODR4Q5SWX8 454 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 WDR78Q5VTH9 848 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 SWSAP1Q6NVH7 229 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 MAEAQ7L5Y9 396 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 ZNF720Q7Z2F6 126 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 ANKRD23Q86SG2 305 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 FAM178BQ8IXR5 827 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 ACTRT1Q8TDG2 376 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 SCFD2Q8WU76 684 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 PIK3R5Q8WYR1 880 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 ATP6V0A1Q93050 837 aa13.5□□□□□ -0.25
COL4A6-204ENST00000461897 CALR3Q96L12 384 aaKnown RBP13.5□□□□□ -0.25
COL4A6-204ENST00000461897 PLXNA1Q9UIW2 1896 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 SYNGAP1Q96PV0 1343 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 ZNF233A6NK53 670 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 EBAG9O00559 213 aa13.49□□□□□ -0.25
COL4A6-204ENST00000461897 PDXKO00764 312 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms