RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 PTENP60484 403 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 HMGN5P82970 282 aaKnown RBP10.21□□□□□ -0.77
BRCA1-207ENST00000461798 CYP4A11Q02928 519 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 C8orf34Q49A92 452 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 TMEM31Q5JXX7 168 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 UBXN11Q5T124 520 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 GLB1LQ6UWU2 654 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 RBM23Q86U06 439 aaKnown RBP10.21□□□□□ -0.77
BRCA1-207ENST00000461798 MRPL43Q8N983 215 aaKnown RBP10.21□□□□□ -0.77
BRCA1-207ENST00000461798 RNF169Q8NCN4 708 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 SMRP1Q8NCR6 262 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 FBXO18Q8NFZ0 1043 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 PGBD4Q96DM1 585 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 C8orf76Q96K31 380 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 POP1Q99575 1024 aaKnown RBP10.21□□□□□ -0.77
BRCA1-207ENST00000461798 MTRQ99707 1265 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 LRFN3Q9BTN0 628 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 TMEM60Q9H2L4 133 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 MINDY3Q9H8M7 445 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 C11orf16Q9NQ32 467 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 SH2B1Q9NRF2 756 aaPredicted RBP10.21□□□□□ -0.77
BRCA1-207ENST00000461798 PCDHB2Q9Y5E7 798 aa10.21□□□□□ -0.77
BRCA1-207ENST00000461798 PER2O15055 1255 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 GALTP07902 379 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 SPATA31C1P0DKV0 1188 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 AXLP30530 894 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 SSTR3P32745 418 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-207ENST00000461798 RBM25P49756 843 aaKnown RBP10.2□□□□□ -0.78
BRCA1-207ENST00000461798 RARRES1P49788 294 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 BCAR1P56945 870 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 CLUL1Q15846 466 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 NOMO2Q5JPE7 1267 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 AGMOQ6ZNB7 445 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 CCDC83Q8IWF9 413 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 RNF149Q8NC42 400 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 CNNM3Q8NE01 707 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 VN1R2Q8NFZ6 395 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 LPPQ93052 612 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 CCDC51Q96ER9 411 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 TCF25Q9BQ70 676 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 POLR3CQ9BUI4 534 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-207ENST00000461798 NFKBIZQ9BYH8 718 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 TUFT1Q9NNX1 390 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 TBC1D13Q9NVG8 400 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 DBR1Q9UK59 544 aaKnown RBP10.2□□□□□ -0.78
BRCA1-207ENST00000461798 ARIH1Q9Y4X5 557 aaPredicted RBP10.2□□□□□ -0.78
BRCA1-207ENST00000461798 IRAK3Q9Y616 596 aa10.2□□□□□ -0.78
BRCA1-207ENST00000461798 CNTNAP2Q9UHC6 1331 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 MEIS3P2A8K0S8 358 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 HIDE1A8MVS5 230 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 INPPL1O15357 1258 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 CSPG5O95196 566 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 HOXB8P17481 243 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-207ENST00000461798 NCLP19338 710 aaKnown RBP10.19□□□□□ -0.78
BRCA1-207ENST00000461798 MCM7P33993 719 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 PBX3P40426 434 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 TRAPPC10P48553 1259 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 GUCY1B3Q02153 619 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 TFDP1Q14186 410 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 CBX2Q14781 532 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-207ENST00000461798 TMC7Q7Z402 723 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 CATSPER3Q86XQ3 398 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 C4orf32Q8N8J7 132 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 SUSD6Q92537 303 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 IGSF21Q96ID5 467 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 NACC1Q96RE7 527 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 S1PR5Q9H228 398 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 NRDE2Q9H7Z3 1164 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 UBN1Q9NPG3 1134 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 ENTPD7Q9NQZ7 604 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 KANSL3Q9P2N6 904 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 BARX2Q9UMQ3 279 aaPredicted RBP10.19□□□□□ -0.78
BRCA1-207ENST00000461798 KIAA1671Q9BY89 1806 aa10.19□□□□□ -0.78
BRCA1-207ENST00000461798 ATG2AQ2TAZ0 1938 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 C2orf71A6NGG8 1288 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 LOC730098B7Z3J9 87 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 NT5C1B-RDH14C9J2C7 533 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 DCXO43602 365 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 TSPAN1O60635 241 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 SRGAP2BP0DMP2 458 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 CHRM1P11229 460 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-207ENST00000461798 MUTP22033 750 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 GLRA2P23416 452 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 U2AF2P26368 475 aaKnown RBP eCLIP10.18□□□□□ -0.781e-6■■■□□ 19.1
BRCA1-207ENST00000461798 RPA1P27694 616 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 FOSBP53539 338 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 MBTD1Q05BQ5 628 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 NCBP1Q09161 790 aaKnown RBP10.18□□□□□ -0.78
BRCA1-207ENST00000461798 GIT2Q14161 759 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 SMC1AQ14683 1233 aaKnown RBP10.18□□□□□ -0.78
BRCA1-207ENST00000461798 BMS1Q14692 1282 aaKnown RBP10.18□□□□□ -0.78
BRCA1-207ENST00000461798 AMHR2Q16671 573 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 HERC4Q5GLZ8 1057 aaPredicted RBP10.18□□□□□ -0.78
BRCA1-207ENST00000461798 PLPP4Q5VZY2 271 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 ANKRD54Q6NXT1 300 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 DDX53Q86TM3 631 aaKnown RBP10.18□□□□□ -0.78
BRCA1-207ENST00000461798 NOSTRINQ8IVI9 506 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 SMG8Q8ND04 991 aaKnown RBP10.18□□□□□ -0.78
BRCA1-207ENST00000461798 ASAP3Q8TDY4 903 aa10.18□□□□□ -0.78
BRCA1-207ENST00000461798 PIGOQ8TEQ8 1089 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms