RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 NELFCDQ8IXH7 590 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 SYCP3Q8IZU3 236 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 CSGALNACT2Q8N6G5 542 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 ZNF507Q8TCN5 953 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 SPIRE2Q8WWL2 714 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 TRIM5Q9C035 493 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 TMEM206Q9H813 350 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 XPNPEP1Q9NQW7 623 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 MAGEC2Q9UBF1 373 aaPredicted RBP16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 PCDHA11Q9Y5I1 949 aa16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 LAMA2P24043 3122 aaKnown RBP16.68■□□□□ 0.26
TMEM39A-203ENST00000461654 C17orf102A2RUQ5 167 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 CALUO43852 315 aaPredicted RBP16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 PRPF6O94906 941 aaKnown RBP16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 SERPINC1P01008 464 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 TPM3P06753 285 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 GNAT1P11488 350 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 ATP2A2P16615 1042 aaKnown RBP16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 TMOD1P28289 359 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 ZNF200P98182 395 aaPredicted RBP16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 ANKRD40Q6AI12 368 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 TTI2Q6NXR4 508 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 HS2ST1Q7LGA3 356 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 HAUS6Q7Z4H7 955 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 GLIS3Q8NEA6 775 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 DEPTORQ8TB45 409 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 GOLGA5Q8TBA6 731 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 MYLIPQ8WY64 445 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 TMEM143Q96AN5 459 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 HVCN1Q96D96 273 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 CEP89Q96ST8 783 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 SLC9A7Q96T83 725 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 ST6GALNAC4Q9H4F1 302 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 THAP9Q9H5L6 903 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 SUGCTQ9HAC7 445 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 EXOC7Q9UPT5 735 aa16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 MYH9P35579 1960 aaKnown RBP16.67■□□□□ 0.26
TMEM39A-203ENST00000461654 TRIM49BA6NDI0 452 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 ZBBXA8MT70 800 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 PDXKO00764 312 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 SLC16A4O15374 487 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 CBFA2T2O43439 604 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 NBNO60934 754 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 CAND2O75155 1236 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 SMIM10L2AP0DMW4 78 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 SMIM10L2BP0DMW5 78 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 RPL13P26373 211 aaKnown RBP16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 DEKP35659 375 aaKnown RBP16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 ARL2P36404 184 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 NAMPTP43490 491 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 NPTX2P47972 431 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 CASP5P51878 434 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 NCKAP1LP55160 1127 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 ADAM17P78536 824 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 TFDP1Q14186 410 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 MXD4Q14582 209 aaPredicted RBP16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 GRIK4Q16099 956 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 SARM1Q6SZW1 724 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 METTL13Q8N6R0 699 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 PSPC1Q8WXF1 523 aaKnown RBP16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 WNT8BQ93098 351 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 ACCSQ96QU6 501 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 MED15Q96RN5 788 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 NTPCRQ9BSD7 190 aaKnown RBP16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 SRRTQ9BXP5 876 aaKnown RBP16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 FGFBP2Q9BYJ0 223 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 TANC1Q9C0D5 1861 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 SLC28A3Q9HAS3 691 aa16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 TYW1Q9NV66 732 aaKnown RBP16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 YBX2Q9Y2T7 364 aaKnown RBP16.66■□□□□ 0.26
TMEM39A-203ENST00000461654 ABHD14A-ACY1A0A1B0GW23 586 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 ZBTB42B2RXF5 422 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 ASAP2O43150 1006 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 ADCY5O95622 1261 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 TPM2P07951 284 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 KLRC1P26715 233 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 PMS1P54277 932 aaKnown RBP16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 FKBP3Q00688 224 aaKnown RBP16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 EDRF1Q3B7T1 1238 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 ZC2HC1CQ53FD0 456 aaPredicted RBP16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 ZNF618Q5T7W0 954 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 EFCAB12Q6NXP0 572 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 TRAPPC12Q8WVT3 735 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 FIZ1Q96SL8 496 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 SAMSN1Q9NSI8 373 aaKnown RBP16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 SUCLA2Q9P2R7 463 aaPredicted RBP16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 PHLPP2Q6ZVD8 1323 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 NRCAMQ92823 1304 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 COL6A3P12111 3177 aa16.65■□□□□ 0.26
TMEM39A-203ENST00000461654 ARID2Q68CP9 1835 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 SCN5AQ14524 2016 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 IGKV6-21A0A0C4DH24 114 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 DENND3A2RUS2 1198 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 LRRIQ4A6NIV6 560 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 CETN3O15182 167 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 TREHO43280 583 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 C22orf31O95567 290 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 FOSL2P15408 326 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 ZNF18P17022 549 aa16.64■□□□□ 0.25
TMEM39A-203ENST00000461654 EEF1GP26641 437 aaKnown RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms