RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 KCNG1Q9UIX4 513 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 PCDHB2Q9Y5E7 798 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 KIAA1671Q9BY89 1806 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 PHLPP2Q6ZVD8 1323 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 NPHP3-ACAD11A0A0J9YXS1 232 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 SFI1A8K8P3 1242 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 CUTAO60888 179 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 ZNF623O75123 536 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 ATF7P17544 494 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 ARF4P18085 180 aaPredicted RBP11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 NCLP19338 710 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 DDIT3P35638 169 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 BMPR1AP36894 532 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 NPTX2P47972 431 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 DNM1Q05193 864 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 GPM6BQ13491 265 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 PRPF4BQ13523 1007 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 AMHR2Q16671 573 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 FAM187BQ17R55 369 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 LONRF3Q496Y0 759 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 PPP4R3CPQ6ZMV5 832 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 CCDC73Q6ZRK6 1079 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 ZNF598Q86UK7 904 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 HACE1Q8IYU2 909 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 DAW1Q8N136 415 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 HELQQ8TDG4 1101 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 PPM1EQ8WY54 764 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 LARP4BQ92615 738 aaKnown RBP11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 LPPQ93052 612 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 CASD1Q96PB1 797 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 KIFC3Q9BVG8 833 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 FZD8Q9H461 694 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 RNF19AQ9NV58 838 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 STK17AQ9UEE5 414 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 PCDHB12Q9Y5F1 795 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 ATP6V1DQ9Y5K8 247 aa11.68□□□□□ -0.54
TRAPPC12-213ENST00000461577 CNTNAP2Q9UHC6 1331 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 H3BNC9 293 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 K7ERI5 159 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 ACKR2O00590 384 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 N4BP3O15049 544 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 B4GALT5O43286 388 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 FAM13AO94988 1023 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 NPTXRO95502 500 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 ITGA4P13612 1032 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 PLS3P13797 630 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 STAT6P42226 847 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 ME1P48163 572 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 SMTNP53814 917 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 CACNB1Q02641 598 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 MAPK7Q13164 816 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 PTPROQ16827 1216 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 ARSHQ5FYA8 562 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 CLLU1OSQ5K130 101 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 UBXN11Q5T124 520 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 SLC27A1Q6PCB7 646 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 GLB1LQ6UWU2 654 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 MRPL10Q7Z7H8 261 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 LRRC43Q8N309 656 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 URGCPQ8TCY9 931 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 LRRC15Q8TF66 581 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 RSPH1Q8WYR4 309 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 ADPGKQ9BRR6 497 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 C11orf84Q9BUA3 381 aaPredicted RBP11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 PLVAPQ9BX97 442 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 EIF2AQ9BY44 585 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 MRPL9Q9BYD2 267 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 PANK2Q9BZ23 570 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 CCDC113Q9H0I3 377 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 ZHX3Q9H4I2 956 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 TMEM134Q9H6X4 195 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 UBN1Q9NPG3 1134 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 TYW1Q9NV66 732 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 LMCD1Q9NZU5 365 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 LARSQ9P2J5 1176 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 ODF2LQ9ULJ1 636 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 INPP5FQ9Y2H2 1132 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 RBM19Q9Y4C8 960 aaKnown RBP11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 MTCH2Q9Y6C9 303 aa11.67□□□□□ -0.54
TRAPPC12-213ENST00000461577 A0A1B0GUA9 196 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 C5orf67F2Z3F1 127 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 SLC16A4O15374 487 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 LPXNO60711 386 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 TBCAO75347 108 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 LAG3P18627 525 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 POU3F3P20264 500 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 KRT85P78386 507 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 RNASELQ05823 741 aaKnown RBP11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 CCDC85BQ15834 202 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 NAALADL2Q58DX5 795 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 SV2BQ7L1I2 683 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 APBB1IPQ7Z5R6 666 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 CDR2LQ86X02 465 aaPredicted RBP11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 MYCT1Q8N699 235 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 PDILTQ8N807 584 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 COLGALT1Q8NBJ5 622 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 SPIRE2Q8WWL2 714 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 P2RX5Q93086 422 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 REEP2Q9BRK0 252 aa11.66□□□□□ -0.54
TRAPPC12-213ENST00000461577 APOL6Q9BWW8 343 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms