RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 GLRA2P23416 452 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 MARK3P27448 753 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 CLCN1P35523 988 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 MATR3P43243 847 aaKnown RBP eCLIP8.13□□□□□ -1.11
LSG1-205ENST00000461343 CYP2J2P51589 502 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 VAMP7P51809 220 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 MCCD1P59942 119 aaPredicted RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 NKX3-2P78367 333 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 MAP2K1Q02750 393 aaPredicted RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 LAMTOR4Q0VGL1 99 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 SNRNP35Q16560 246 aaKnown RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 FSCN1Q16658 493 aaKnown RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 FAM187BQ17R55 369 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 TMEM132AQ24JP5 1023 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 SLC9C1Q4G0N8 1177 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 ZC2HC1CQ53FD0 456 aaPredicted RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 MIIPQ5JXC2 388 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 C10orf76Q5T2E6 689 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 CYP4F22Q6NT55 531 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 EFCAB12Q6NXP0 572 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 IFNLR1Q8IU57 520 aaPredicted RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 METTL13Q8N6R0 699 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 SLAIN1Q8ND83 568 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 NPLOC4Q8TAT6 608 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 CACTINQ8WUQ7 758 aaKnown RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 UBE2Q2Q8WVN8 375 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 PRPF31Q8WWY3 499 aaKnown RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 FAXDC2Q96IV6 333 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 CALR3Q96L12 384 aaKnown RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 SCLT1Q96NL6 688 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 SPAG5Q96R06 1193 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 ADPGKQ9BRR6 497 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 MTG1Q9BT17 334 aaPredicted RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 TSGA10Q9BZW7 698 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 TMX1Q9H3N1 280 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 FAM124BQ9H5Z6 455 aaPredicted RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 SUGCTQ9HAC7 445 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 XPNPEP1Q9NQW7 623 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 PDGFCQ9NRA1 345 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 ABHD10Q9NUJ1 306 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 SPTLC3Q9NUV7 552 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 INTS13Q9NVM9 706 aa8.13□□□□□ -1.11
LSG1-205ENST00000461343 GNEQ9Y223 722 aaKnown RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 R3HCC1Q9Y3T6 440 aaKnown RBP8.13□□□□□ -1.11
LSG1-205ENST00000461343 MCM3APO60318 1980 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 SMIM35A0A1B0GVV1 85 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 DYNC1LI2O43237 492 aaPredicted RBP8.12□□□□□ -1.11
LSG1-205ENST00000461343 PEX10O60683 326 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 OFD1O75665 1012 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 ERLIN2O94905 339 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 IL18RAPO95256 599 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 C22orf31O95567 290 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 GYPCP04921 128 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 ZNF865P0CJ78 1059 aaPredicted RBP8.12□□□□□ -1.11
LSG1-205ENST00000461343 INSRRP14616 1297 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 ATP4AP20648 1035 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 AXLP30530 894 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 HNRNPH3P31942 346 aaKnown RBP8.12□□□□□ -1.11
LSG1-205ENST00000461343 CASP14P31944 242 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 GJA9P57773 515 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 MYL7Q01449 175 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 PTPN11Q06124 597 aaPredicted RBP8.12□□□□□ -1.11
LSG1-205ENST00000461343 RBL2Q08999 1139 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 PRPF4BQ13523 1007 aaKnown RBP8.12□□□□□ -1.11
LSG1-205ENST00000461343 NOLC1Q14978 699 aaKnown RBP eCLIP8.12□□□□□ -1.11
LSG1-205ENST00000461343 SPA17Q15506 151 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 GRIK4Q16099 956 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 DCAF4L1Q3SXM0 396 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 DNTTIP2Q5QJE6 756 aaKnown RBP8.12□□□□□ -1.11
LSG1-205ENST00000461343 KRT39Q6A163 491 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 PPP1R2P3Q6NXS1 205 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 TRMT1LQ7Z2T5 733 aaKnown RBP8.12□□□□□ -1.11
LSG1-205ENST00000461343 RNF180Q86T96 592 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 NT5DC4Q86YG4 428 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 CD302Q8IX05 232 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 HACE1Q8IYU2 909 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 C7orf31Q8N865 590 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 TC2NQ8N9U0 490 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 RNF149Q8NC42 400 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 RAET1EQ8TD07 263 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 SLC35C1Q96A29 364 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 JAKMIP2Q96AA8 810 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 TMEM143Q96AN5 459 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 CCDC42Q96M95 316 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 FBXL18Q96ME1 805 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 C16orf70Q9BSU1 422 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 TCHPQ9BT92 498 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 GCOM2Q9BZD3 368 aaPredicted RBP8.12□□□□□ -1.11
LSG1-205ENST00000461343 IMPG2Q9BZV3 1241 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 UPF3AQ9H1J1 476 aaKnown RBP8.12□□□□□ -1.11
LSG1-205ENST00000461343 DEF6Q9H4E7 631 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 GPRC5CQ9NQ84 441 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 GCNT4Q9P109 453 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 MYO1AQ9UBC5 1043 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 SRRDQ9UH36 339 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 AGO2Q9UKV8 859 aaKnown RBP8.12□□□□□ -1.11
LSG1-205ENST00000461343 PLAGL2Q9UPG8 496 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 AKT3Q9Y243 479 aa8.12□□□□□ -1.11
LSG1-205ENST00000461343 SSU72P8A0A1W2PR75 194 aa8.11□□□□□ -1.11
LSG1-205ENST00000461343 C17orf102A2RUQ5 167 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms