RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 HAUS3Q68CZ6 603 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 PDE12Q6L8Q7 609 aaKnown RBP6.66□□□□□ -1.34
NUP98-208ENST00000461047 FAM117BQ6P1L5 589 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 CCDC62Q6P9F0 684 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 METTL7BQ6UX53 244 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 FOXD4L3Q6VB84 417 aaPredicted RBP6.66□□□□□ -1.34
NUP98-208ENST00000461047 CYFIP1Q7L576 1253 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 MIER3Q7Z3K6 550 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 RASSF8Q8NHQ8 419 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 HELQQ8TDG4 1101 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 SH3TC2Q8TF17 1288 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 SEPT1Q8WYJ6 367 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 ATP6V0A1Q93050 837 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 ARMC5Q96C12 935 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 CDK5RAP3Q96JB5 506 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 FGD4Q96M96 766 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 AK8Q96MA6 479 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 CCDC43Q96MW1 224 aaKnown RBP6.66□□□□□ -1.34
NUP98-208ENST00000461047 PYM1Q9BRP8 204 aaKnown RBP6.66□□□□□ -1.34
NUP98-208ENST00000461047 SEZ6LQ9BYH1 1024 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 MCOLN1Q9GZU1 580 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.66□□□□□ -1.34
NUP98-208ENST00000461047 TTC12Q9H892 705 aaPredicted RBP6.66□□□□□ -1.34
NUP98-208ENST00000461047 KCNMB3Q9NPA1 279 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 XPNPEP3Q9NQH7 507 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 LRWD1Q9UFC0 647 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 CCDC39Q9UFE4 941 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 ZNF215Q9UL58 517 aaPredicted RBP6.66□□□□□ -1.34
NUP98-208ENST00000461047 TRIM33Q9UPN9 1127 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 PPME1Q9Y570 386 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 PCDHB6Q9Y5E3 794 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 PCDHA10Q9Y5I2 948 aa6.66□□□□□ -1.34
NUP98-208ENST00000461047 DDX39AO00148 427 aaKnown RBP6.65□□□□□ -1.34
NUP98-208ENST00000461047 DLL1O00548 723 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 ADAMTS3O15072 1205 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 IGHA2P01877 340 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 GJB1P08034 283 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 C6orf222P0C671 652 aaPredicted RBP6.65□□□□□ -1.34
NUP98-208ENST00000461047 PTMSP20962 102 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 UBA1P22314 1058 aaKnown RBP6.65□□□□□ -1.34
NUP98-208ENST00000461047 CCND3P30281 292 aaPredicted RBP6.65□□□□□ -1.34
NUP98-208ENST00000461047 DDIT3P35638 169 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 TECP42680 631 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 NASPP49321 788 aaPredicted RBP6.65□□□□□ -1.34
NUP98-208ENST00000461047 SLC26A2P50443 739 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 TOB1P50616 345 aaPredicted RBP6.65□□□□□ -1.34
NUP98-208ENST00000461047 GJA9P57773 515 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 DNM1Q05193 864 aaKnown RBP6.65□□□□□ -1.34
NUP98-208ENST00000461047 PPP2R5CQ13362 524 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 EPHA7Q15375 998 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 FSCN1Q16658 493 aaKnown RBP6.65□□□□□ -1.34
NUP98-208ENST00000461047 LY6KQ17RY6 165 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 EARS2Q5JPH6 523 aaKnown RBP6.65□□□□□ -1.34
NUP98-208ENST00000461047 KRT79Q5XKE5 535 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 OTUD6AQ7L8S5 288 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 TLK2Q86UE8 772 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 CKAP2LQ8IYA6 745 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 EXOC8Q8IYI6 725 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 PPTC7Q8NI37 304 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 CYP2W1Q8TAV3 490 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 NEK9Q8TD19 979 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 GLG1Q92896 1179 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 CALML4Q96GE6 196 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 DEFB118Q96PH6 123 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 USP28Q96RU2 1077 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 KATNAL1Q9BW62 490 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 LACRTQ9GZZ8 138 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 SMARCAD1Q9H4L7 1026 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 AKTIPQ9H8T0 292 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 PDGFCQ9NRA1 345 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 DISC1Q9NRI5 854 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 NRBP2Q9NSY0 501 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 RCOR1Q9UKL0 485 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 CLIC4Q9Y696 253 aa6.65□□□□□ -1.34
NUP98-208ENST00000461047 MORC2Q9Y6X9 1032 aaPredicted RBP6.65□□□□□ -1.34
NUP98-208ENST00000461047 ASTN1O14525 1302 aa6.65□□□□□ -1.35
NUP98-208ENST00000461047 ELP1O95163 1332 aa6.65□□□□□ -1.35
NUP98-208ENST00000461047 BAZ2BQ9UIF8 2168 aaKnown RBP6.64□□□□□ -1.35
NUP98-208ENST00000461047 VWA3AA6NCI4 1184 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 CHMP2AO43633 222 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 SLC37A4O43826 429 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 CUTAO60888 179 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 PSMD10O75832 226 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 FARP2O94887 1054 aaPredicted RBP6.64□□□□□ -1.35
NUP98-208ENST00000461047 SGPL1O95470 568 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 P4HBP07237 508 aaKnown RBP6.64□□□□□ -1.35
NUP98-208ENST00000461047 MYL3P08590 195 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 GNAT1P11488 350 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 KCNA2P16389 499 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 MUTP22033 750 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 ITGB7P26010 798 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 NOS3P29474 1203 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 CCT6AP40227 531 aaKnown RBP6.64□□□□□ -1.35
NUP98-208ENST00000461047 STAT5BP51692 787 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 ACTR2P61160 394 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 SP4Q02446 784 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 ARHGAP1Q07960 439 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 PKP1Q13835 747 aa6.64□□□□□ -1.35
NUP98-208ENST00000461047 UTP14CQ5TAP6 766 aaKnown RBP6.64□□□□□ -1.35
NUP98-208ENST00000461047 NCAPH2Q6IBW4 605 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms