RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 PCDHB6Q9Y5E3 794 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 FAM205AQ6ZU69 1335 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 hCG_1642624A0A1W2PR95 340 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 KLRG2A4D1S0 409 aaPredicted RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 LAD1O00515 517 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CTNND1O60716 968 aaKnown RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SMIM24O75264 130 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 PPFIA2O75334 1257 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TAF5LO75529 589 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CIB2O75838 187 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 GGPS1O95749 300 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SCG2P13521 617 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MCAMP43121 646 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 AP1B1Q10567 949 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 IFRD2Q12894 506 aaPredicted RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TMED2Q15363 201 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CCHCR1Q8TD31 782 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 USP13Q92995 863 aaPredicted RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 FAM129AQ9BZQ8 928 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SMARCAD1Q9H4L7 1026 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CXorf56Q9H5V9 222 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 METTL14Q9HCE5 456 aaKnown RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ANKFY1Q9P2R3 1169 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MYO1AQ9UBC5 1043 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SAE1Q9UBE0 346 aaPredicted RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 INPP5FQ9Y2H2 1132 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TACC3Q9Y6A5 838 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 FAM95CA0A1B0GW59 222 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 RGS16O15492 202 aaPredicted RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 STRNO43815 780 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CCNT1O60563 726 aaKnown RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 HIP1RO75146 1068 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 C21orf59P57076 290 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SLC39A14Q15043 492 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 RBBP5Q15291 538 aaKnown RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MUM1Q2TAK8 710 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 DENND2CQ68D51 928 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SNRNP48Q6IEG0 339 aaKnown RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ZNF438Q7Z4V0 828 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 NOSTRINQ8IVI9 506 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CMTR1Q8N1G2 835 aaKnown RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SNX19Q92543 992 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 DHX38Q92620 1227 aaKnown RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ZNF594Q96JF6 807 aaPredicted RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ACCSQ96QU6 501 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 XPO6Q96QU8 1125 aaKnown RBP6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TCF25Q9BQ70 676 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ARHGAP9Q9BRR9 750 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ZNF577Q9BSK1 485 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MAGEB5Q9BZ81 275 aa6.69□□□□□ -1.34
HLA-DQA1-205ENST00000460633 PSMD14O00487 310 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 IL1R1P14778 569 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 GGCXP38435 758 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 EPHB4P54760 987 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CDR2Q01850 454 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SPATA2LQ8IUW3 424 aaPredicted RBP6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 GRAMD1CQ8IYS0 662 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 VPS52Q8N1B4 723 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MIPOL1Q8TD10 442 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TFB1MQ8WVM0 346 aaKnown RBP6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SYT17Q9BSW7 474 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MTG1Q9BT17 334 aaPredicted RBP6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MAN1B1Q9UKM7 699 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 KCNK3O14649 394 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 RPS6KA5O75582 802 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 RNF8O76064 485 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TCP1P17987 556 aaKnown RBP6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 EPHB3P54753 998 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 PDE1BQ01064 536 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SFMBT2Q5VUG0 894 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SNX29Q8TEQ0 813 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 GBP5Q96PP8 586 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 KRT12Q99456 494 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 NLNQ9BYT8 704 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 NLRC4Q9NPP4 1024 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 UXTQ9UBK9 157 aaPredicted RBP6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 FAM170AA1A519 330 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 LUC7L3O95232 432 aaKnown RBP6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 NOP14P78316 857 aaKnown RBP6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SLC7A5Q01650 507 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 DDR1Q08345 913 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 FYB2Q5VWT5 728 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ANKS6Q68DC2 871 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SMYD4Q8IYR2 804 aaPredicted RBP6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SYCE1Q8N0S2 351 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ANKRD13CQ8N6S4 541 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MCUR1Q96AQ8 359 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SAMD11Q96NU1 681 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 FAM49AQ9H0Q0 323 aaPredicted RBP6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ARMT1Q9H993 441 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 EPB41L5Q9HCM4 733 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 VPS54Q9P1Q0 977 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SYNPO2Q9UMS6 1093 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 LY75O60449 1722 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 M0QYT0 321 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CHRNA5P30532 468 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 NDUFV1P49821 464 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 PTPN12Q05209 780 aaKnown RBP6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 KLHL30Q0D2K2 578 aa6.68□□□□□ -1.34
HLA-DQA1-205ENST00000460633 RINLQ6ZS11 566 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms