RNA–Protein interactions for RNA: ENST00000460235.1

HDAC4-206, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 343 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-206ENST00000460235 HNRNPDLO14979 420 aaKnown RBP13.54□□□□□ -0.24
HDAC4-206ENST00000460235 N4BP3O15049 544 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 CHRNA1P02708 482 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 ACTN1P12814 892 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 ERCC5P28715 1186 aaPredicted RBP13.54□□□□□ -0.24
HDAC4-206ENST00000460235 NMT1P30419 496 aaKnown RBP13.54□□□□□ -0.24
HDAC4-206ENST00000460235 MBTD1Q05BQ5 628 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 LRRC63Q05C16 580 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 MGAT3Q09327 533 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 STK4Q13043 487 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 PPIGQ13427 754 aaKnown RBP eCLIP13.54□□□□□ -0.248e-9■□□□□ 9.9
HDAC4-206ENST00000460235 MYBPC2Q14324 1141 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 ZSCAN23Q3MJ62 389 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 FBXO47Q5MNV8 452 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 MAP4K3Q8IVH8 894 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 BSNDQ8WZ55 320 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 DHX38Q92620 1227 aaKnown RBP13.54□□□□□ -0.24
HDAC4-206ENST00000460235 ZBTB10Q96DT7 871 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 CTAGE1Q96RT6 745 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 TCHPQ9BT92 498 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 KIAA1586Q9HCI6 787 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 POLD4Q9HCU8 107 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 EVPLQ92817 2033 aa13.54□□□□□ -0.24
HDAC4-206ENST00000460235 PDXKO00764 312 aa13.53□□□□□ -0.24
HDAC4-206ENST00000460235 CLDN3O15551 220 aa13.53□□□□□ -0.24
HDAC4-206ENST00000460235 TOM1L1O75674 476 aa13.53□□□□□ -0.24
HDAC4-206ENST00000460235 LDHAP00338 332 aaKnown RBP13.53□□□□□ -0.24
HDAC4-206ENST00000460235 PIGRP01833 764 aa13.53□□□□□ -0.24
HDAC4-206ENST00000460235 MATR3P43243 847 aaKnown RBP eCLIP13.53□□□□□ -0.24
HDAC4-206ENST00000460235 RAB27AP51159 221 aa13.53□□□□□ -0.24
HDAC4-206ENST00000460235 TPM4P67936 248 aa13.53□□□□□ -0.24
HDAC4-206ENST00000460235 NFX1Q12986 1120 aaKnown RBP13.53□□□□□ -0.24
HDAC4-206ENST00000460235 TPD52L1Q16890 204 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-206ENST00000460235 MFSD5Q6N075 450 aa13.53□□□□□ -0.24
HDAC4-206ENST00000460235 EPM2AIP1Q7L775 607 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-206ENST00000460235 USP37Q86T82 979 aa13.53□□□□□ -0.24
HDAC4-206ENST00000460235 IFIH1Q9BYX4 1025 aaKnown RBP13.53□□□□□ -0.24
HDAC4-206ENST00000460235 PPP1R12CQ9BZL4 782 aa13.53□□□□□ -0.24
HDAC4-206ENST00000460235 TRIM6Q9C030 488 aaPredicted RBP13.53□□□□□ -0.24
HDAC4-206ENST00000460235 MTIF3Q9H2K0 278 aaKnown RBP13.53□□□□□ -0.24
HDAC4-206ENST00000460235 TYW1Q9NV66 732 aaKnown RBP13.53□□□□□ -0.24
HDAC4-206ENST00000460235 MYH11P35749 1972 aa13.52□□□□□ -0.24
HDAC4-206ENST00000460235 SYCE3A1L190 88 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 SMTNL1A8MU46 457 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 PPP1R37O75864 691 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 PRPF6O94906 941 aaKnown RBP13.52□□□□□ -0.25
HDAC4-206ENST00000460235 GHRP10912 638 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 PRKCSHP14314 528 aaPredicted RBP13.52□□□□□ -0.25
HDAC4-206ENST00000460235 GARTP22102 1010 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 TYRO3Q06418 890 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 PAK1Q13153 545 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 EDRF1Q3B7T1 1238 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 DCAF4L1Q3SXM0 396 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 ATF7IP2Q5U623 682 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 C7orf61Q8IZ16 206 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 ADSSL1Q8N142 457 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 SCFD1Q8WVM8 642 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 RSPH1Q8WYR4 309 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 ERCC4Q92889 916 aaPredicted RBP13.52□□□□□ -0.25
HDAC4-206ENST00000460235 FIZ1Q96SL8 496 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 PPP1R16BQ96T49 567 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 STRA6Q9BX79 667 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 CCDC113Q9H0I3 377 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 C1orf112Q9NSG2 853 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 AGPAT5Q9NUQ2 364 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 ST3GAL5Q9UNP4 418 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 TNFSF13BQ9Y275 285 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.52□□□□□ -0.25
HDAC4-206ENST00000460235 CNTNAP2Q9UHC6 1331 aa13.52□□□□□ -0.25
HDAC4-206ENST00000460235 TRIP12Q14669 1992 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-206ENST00000460235 A0A1B0GUA9 196 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 MYBP10242 640 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 CCNE1P24864 410 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 CYP2C18P33260 490 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 PRCPP42785 496 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 POU5F1Q01860 360 aaKnown RBP13.51□□□□□ -0.25
HDAC4-206ENST00000460235 IKBKEQ14164 716 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 LPIN1Q14693 890 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 ZC2HC1CQ53FD0 456 aaPredicted RBP13.51□□□□□ -0.25
HDAC4-206ENST00000460235 ISM2Q6H9L7 571 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 TWF2Q6IBS0 349 aaKnown RBP13.51□□□□□ -0.25
HDAC4-206ENST00000460235 ARMCX5Q6P1M9 558 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 SLC27A1Q6PCB7 646 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 MPZL3Q6UWV2 235 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 FAM114A1Q8IWE2 563 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 KIAA0895Q8NCT3 520 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 NOC3LQ8WTT2 800 aaKnown RBP13.51□□□□□ -0.25
HDAC4-206ENST00000460235 P2RX5Q93086 422 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 ACO2Q99798 780 aaKnown RBP13.51□□□□□ -0.25
HDAC4-206ENST00000460235 KIFC3Q9BVG8 833 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 RWDD2AQ9UIY3 292 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 PADI3Q9ULW8 664 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 PIN4Q9Y237 131 aaKnown RBP13.51□□□□□ -0.25
HDAC4-206ENST00000460235 FRMD4BQ9Y2L6 1034 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 GDAQ9Y2T3 454 aa13.51□□□□□ -0.25
HDAC4-206ENST00000460235 NOC2LQ9Y3T9 749 aaKnown RBP13.51□□□□□ -0.25
HDAC4-206ENST00000460235 ADGRA3Q8IWK6 1321 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 ABHD14A-ACY1A0A1B0GW23 586 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 BECN2A8MW95 431 aa13.5□□□□□ -0.25
HDAC4-206ENST00000460235 CETN3O15182 167 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms