RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 CLIC4Q9Y696 253 aa16.53■□□□□ 0.24
ATG4B-213ENST00000460211 GRXCR2A6NFK2 248 aa16.52■□□□□ 0.24
ATG4B-213ENST00000460211 NAMPTP43490 491 aa16.52■□□□□ 0.24
ATG4B-213ENST00000460211 GATMP50440 423 aa16.52■□□□□ 0.24
ATG4B-213ENST00000460211 CEBPZQ03701 1054 aaKnown RBP16.52■□□□□ 0.24
ATG4B-213ENST00000460211 MBTD1Q05BQ5 628 aa16.52■□□□□ 0.24
ATG4B-213ENST00000460211 CSPP1Q1MSJ5 1256 aa16.52■□□□□ 0.24
ATG4B-213ENST00000460211 FAM173BQ6P4H8 233 aa16.52■□□□□ 0.24
ATG4B-213ENST00000460211 ZNF598Q86UK7 904 aaKnown RBP16.52■□□□□ 0.24
ATG4B-213ENST00000460211 P2RX5Q93086 422 aa16.52■□□□□ 0.24
ATG4B-213ENST00000460211 DRC1Q96MC2 740 aa16.52■□□□□ 0.24
ATG4B-213ENST00000460211 PLIN2Q99541 437 aa16.52■□□□□ 0.24
ATG4B-213ENST00000460211 MRPL9Q9BYD2 267 aaKnown RBP16.52■□□□□ 0.24
ATG4B-213ENST00000460211 PRMT7Q9NVM4 692 aaPredicted RBP16.52■□□□□ 0.24
ATG4B-213ENST00000460211 PCDHB2Q9Y5E7 798 aa16.52■□□□□ 0.24
ATG4B-213ENST00000460211 TSPAN1O60635 241 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 LAG3P18627 525 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 MARCKSP29966 332 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-213ENST00000460211 HOXA11P31270 313 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-213ENST00000460211 TXLNAP40222 546 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 EFNA5P52803 228 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 PTPAQ15257 358 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 MAPK6Q16659 721 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 TMEM132AQ24JP5 1023 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 TCEAL5Q5H9L2 206 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 RINT1Q6NUQ1 792 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 GLB1LQ6UWU2 654 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 HACE1Q8IYU2 909 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 LRRC43Q8N309 656 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 SPRYD3Q8NCJ5 442 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 PRIMPOLQ96LW4 560 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 CASD1Q96PB1 797 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 PNMA5Q96PV4 448 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 TRIM6Q9C030 488 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-213ENST00000460211 LMAN2LQ9H0V9 348 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 C17orf75Q9HAS0 396 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 UBN1Q9NPG3 1134 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 TYW1Q9NV66 732 aaKnown RBP16.51■□□□□ 0.23
ATG4B-213ENST00000460211 KCND2Q9NZV8 630 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 DAXXQ9UER7 740 aaPredicted RBP16.51■□□□□ 0.23
ATG4B-213ENST00000460211 CCDC39Q9UFE4 941 aa16.51■□□□□ 0.23
ATG4B-213ENST00000460211 SRPRBQ9Y5M8 271 aaKnown RBP16.51■□□□□ 0.23
ATG4B-213ENST00000460211 CARNS1A5YM72 827 aa16.5■□□□□ 0.23
ATG4B-213ENST00000460211 LINC00271P0C7V0 271 aa16.5■□□□□ 0.23
ATG4B-213ENST00000460211 PLA2G4BP0C869 781 aa16.5■□□□□ 0.23
ATG4B-213ENST00000460211 ALADP13716 330 aa16.5■□□□□ 0.23
ATG4B-213ENST00000460211 TMEM119Q4V9L6 283 aa16.5■□□□□ 0.23
ATG4B-213ENST00000460211 TIGD5Q53EQ6 642 aa16.5■□□□□ 0.23
ATG4B-213ENST00000460211 CDCA2Q69YH5 1023 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-213ENST00000460211 PPP4R3CPQ6ZMV5 832 aa16.5■□□□□ 0.23
ATG4B-213ENST00000460211 KCNK18Q7Z418 384 aa16.5■□□□□ 0.23
ATG4B-213ENST00000460211 SYT2Q8N9I0 419 aaPredicted RBP16.5■□□□□ 0.23
ATG4B-213ENST00000460211 CCSER1Q9C0I3 900 aa16.5■□□□□ 0.23
ATG4B-213ENST00000460211 CSRNP2Q9H175 543 aa16.5■□□□□ 0.23
ATG4B-213ENST00000460211 PHLPP2Q6ZVD8 1323 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 CCDC169A6NNP5 214 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 HIP1RO75146 1068 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 ZSCAN22P10073 491 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-213ENST00000460211 ATF7P17544 494 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-213ENST00000460211 ARF4P18085 180 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-213ENST00000460211 GUCY2CP25092 1073 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 DMP1Q13316 513 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-213ENST00000460211 BECN1Q14457 450 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 SLC39A14Q15043 492 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 STK38Q15208 465 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 FAM187BQ17R55 369 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 CLLU1OSQ5K130 101 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 C1orf186Q6ZWK4 172 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 MRPL10Q7Z7H8 261 aaKnown RBP16.49■□□□□ 0.23
ATG4B-213ENST00000460211 URGCPQ8TCY9 931 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 HELQQ8TDG4 1101 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 BSNDQ8WZ55 320 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 CPB2Q96IY4 423 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 USP28Q96RU2 1077 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 FZD8Q9H461 694 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 RNF19AQ9NV58 838 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 CLDND1Q9NY35 253 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 PLAGL2Q9UPG8 496 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 MORC2Q9Y6X9 1032 aaPredicted RBP16.49■□□□□ 0.23
ATG4B-213ENST00000460211 ARID2Q68CP9 1835 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 ATG2AQ2TAZ0 1938 aa16.49■□□□□ 0.23
ATG4B-213ENST00000460211 CNTNAP2Q9UHC6 1331 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 A0A1B0GUA9 196 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 K7ERI5 159 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 DCXO43602 365 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 CSPG5O95196 566 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 ITGA4P13612 1032 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 LIG1P18858 919 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 NCLP19338 710 aaKnown RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 PPM1AP35813 382 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 NASPP49321 788 aaPredicted RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 SLC12A3P55017 1021 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 PEX3P56589 373 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 GRIN1Q05586 938 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 RNASELQ05823 741 aaKnown RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 PRPF4BQ13523 1007 aaKnown RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 AMHR2Q16671 573 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 PUS10Q3MIT2 529 aaKnown RBP16.48■□□□□ 0.23
ATG4B-213ENST00000460211 LONRF3Q496Y0 759 aa16.48■□□□□ 0.23
ATG4B-213ENST00000460211 NOMO2Q5JPE7 1267 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms