RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 STBD1O95210 358 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 GNA14O95837 355 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 RPL13P26373 211 aaKnown RBP11.29□□□□□ -0.6
HERC4-207ENST00000460168 POLGP54098 1239 aaPredicted RBP11.29□□□□□ -0.6
HERC4-207ENST00000460168 PEX3P56589 373 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 DMP1Q13316 513 aaPredicted RBP11.29□□□□□ -0.6
HERC4-207ENST00000460168 HS2ST1Q7LGA3 356 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 SYCP3Q8IZU3 236 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 MCPH1Q8NEM0 835 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 KIFAP3Q92845 792 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 COPS5Q92905 334 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 MAML3Q96JK9 1138 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 ATP6V0A4Q9HBG4 840 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 ZFYVE28Q9HCC9 887 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.29□□□□□ -0.6
HERC4-207ENST00000460168 PYCARDQ9ULZ3 195 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 RABL2BQ9UNT1 228 aa11.29□□□□□ -0.6
HERC4-207ENST00000460168 DIS3Q9Y2L1 958 aaKnown RBP11.29□□□□□ -0.6
HERC4-207ENST00000460168 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.29□□□□□ -0.6
HERC4-207ENST00000460168 CCDC169A6NNP5 214 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 TPPPO94811 219 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 MAPTP10636 758 aaKnown RBP11.28□□□□□ -0.6
HERC4-207ENST00000460168 ATP4AP20648 1035 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 TPP2P29144 1249 aaPredicted RBP11.28□□□□□ -0.6
HERC4-207ENST00000460168 STIP1P31948 543 aaKnown RBP11.28□□□□□ -0.6
HERC4-207ENST00000460168 SMTNP53814 917 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 SLC7A5Q01650 507 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 GOLGA8FQ08AF8 430 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 GOLGA8DPQ0D2H9 430 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 TBX2Q13207 712 aaPredicted RBP11.28□□□□□ -0.6
HERC4-207ENST00000460168 ALCAMQ13740 583 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 MAN2A1Q16706 1144 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 FKBP15Q5T1M5 1219 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 MAMDC4Q6UXC1 1216 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 TTC30AQ86WT1 665 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 CPLX3Q8WVH0 158 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 PCYT2Q99447 389 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 GPR20Q99678 358 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 TINF2Q9BSI4 451 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 TRAIPQ9BWF2 469 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 GBP3Q9H0R5 595 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 NRBP2Q9NSY0 501 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 ITIH6Q6UXX5 1313 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 NKRFO15226 690 aaKnown RBP eCLIP11.28□□□□□ -0.6
HERC4-207ENST00000460168 CLIC2O15247 247 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 TGFB1I1O43294 461 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 NR3C1P04150 777 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 IVLP07476 585 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 MARK3P27448 753 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 APLP1P51693 650 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 ADKP55263 362 aaKnown RBP11.28□□□□□ -0.6
HERC4-207ENST00000460168 SOX10P56693 466 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 CORO7P57737 925 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 CCZ1BP86790 482 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 CCZ1P86791 482 aaPredicted RBP11.28□□□□□ -0.6
HERC4-207ENST00000460168 PRPF4BQ13523 1007 aaKnown RBP11.28□□□□□ -0.6
HERC4-207ENST00000460168 VWA3BQ502W6 1294 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 MIIPQ5JXC2 388 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 TMEM63BQ5T3F8 832 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 SFMBT2Q5VUG0 894 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 CEP135Q66GS9 1140 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 TAPT1Q6NXT6 567 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 TRIM50Q86XT4 487 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 SLC17A8Q8NDX2 589 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 AFAP1L1Q8TED9 768 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 SLC7A3Q8WY07 619 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 NDST4Q9H3R1 872 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 ZMYM2Q9UBW7 1377 aa11.28□□□□□ -0.6
HERC4-207ENST00000460168 A0A1W2PQC6 194 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 SLC16A4O15374 487 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 CREB3O43889 395 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 PPP1R37O75864 691 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 SNAI1O95863 264 aaPredicted RBP11.27□□□□□ -0.61
HERC4-207ENST00000460168 ADCYAP1R1P41586 468 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 GJA8P48165 433 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 SESN3P58005 492 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 RBL2Q08999 1139 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 SFSWAPQ12872 951 aaKnown RBP11.27□□□□□ -0.61
HERC4-207ENST00000460168 CRHR2Q13324 411 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 EMC2Q15006 297 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 C17orf99Q6UX52 265 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 HAUS6Q7Z4H7 955 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 CCDC112Q8NEF3 446 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 NPLOC4Q8TAT6 608 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 KIAA1524Q8TCG1 905 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 TAF4BQ92750 862 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 FAM167AQ96KS9 214 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 PCMTD1Q96MG8 357 aaPredicted RBP11.27□□□□□ -0.61
HERC4-207ENST00000460168 ABHD16BQ9H3Z7 469 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 C17orf75Q9HAS0 396 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 TMEM98Q9Y2Y6 226 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 EIF3CLB5ME19 914 aaKnown RBP11.27□□□□□ -0.61
HERC4-207ENST00000460168 AKR1B15C9JRZ8 316 aaPredicted RBP11.27□□□□□ -0.61
HERC4-207ENST00000460168 TOMM70O94826 608 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 GYPCP04921 128 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 PYGLP06737 847 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 CASP14P31944 242 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 NPTX2P47972 431 aa11.27□□□□□ -0.61
HERC4-207ENST00000460168 RAB27AP51159 221 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms