RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 TMEM173Q86WV6 379 aaPredicted RBP25.36■■□□□ 1.65
PTPN4-207ENST00000460162 IFNLR1Q8IU57 520 aaPredicted RBP25.36■■□□□ 1.65
PTPN4-207ENST00000460162 CNNM3Q8NE01 707 aa25.36■■□□□ 1.65
PTPN4-207ENST00000460162 CCDC51Q96ER9 411 aa25.36■■□□□ 1.65
PTPN4-207ENST00000460162 IGSF21Q96ID5 467 aa25.36■■□□□ 1.65
PTPN4-207ENST00000460162 RSAD1Q9HA92 442 aa25.36■■□□□ 1.65
PTPN4-207ENST00000460162 HCFC2Q9Y5Z7 792 aa25.36■■□□□ 1.65
PTPN4-207ENST00000460162 AXLP30530 894 aa25.35■■□□□ 1.65
PTPN4-207ENST00000460162 RARRES1P49788 294 aa25.35■■□□□ 1.65
PTPN4-207ENST00000460162 PTENP60484 403 aa25.35■■□□□ 1.65
PTPN4-207ENST00000460162 POU5F1BQ06416 359 aa25.35■■□□□ 1.65
PTPN4-207ENST00000460162 GIT2Q14161 759 aa25.35■■□□□ 1.65
PTPN4-207ENST00000460162 SYCE2Q6PIF2 218 aa25.35■■□□□ 1.65
PTPN4-207ENST00000460162 DDX53Q86TM3 631 aaKnown RBP25.35■■□□□ 1.65
PTPN4-207ENST00000460162 VPS52Q8N1B4 723 aa25.35■■□□□ 1.65
PTPN4-207ENST00000460162 LLPHQ9BRT6 129 aaKnown RBP25.35■■□□□ 1.65
PTPN4-207ENST00000460162 S1PR5Q9H228 398 aa25.35■■□□□ 1.65
PTPN4-207ENST00000460162 STK39Q9UEW8 545 aa25.35■■□□□ 1.65
PTPN4-207ENST00000460162 IRAK3Q9Y616 596 aa25.35■■□□□ 1.65
PTPN4-207ENST00000460162 TRIOO75962 3097 aa25.34■■□□□ 1.65
PTPN4-207ENST00000460162 POTEMA6NI47 508 aa25.34■■□□□ 1.65
PTPN4-207ENST00000460162 TSPAN1O60635 241 aa25.34■■□□□ 1.65
PTPN4-207ENST00000460162 GALTP07902 379 aa25.34■■□□□ 1.65
PTPN4-207ENST00000460162 NCLP19338 710 aaKnown RBP25.34■■□□□ 1.65
PTPN4-207ENST00000460162 ORC2Q13416 577 aaPredicted RBP25.34■■□□□ 1.65
PTPN4-207ENST00000460162 NFKBIZQ9BYH8 718 aa25.34■■□□□ 1.65
PTPN4-207ENST00000460162 KANSL3Q9P2N6 904 aa25.34■■□□□ 1.65
PTPN4-207ENST00000460162 DNAJB4Q9UDY4 337 aa25.34■■□□□ 1.65
PTPN4-207ENST00000460162 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.33■■□□□ 1.65
PTPN4-207ENST00000460162 CTSAP10619 480 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 CA8P35219 290 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 SLC11A1P49279 550 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 CAPSQ13938 189 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 TPRNQ4KMQ1 711 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 NOTUMQ6P988 496 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 CCDC83Q8IWF9 413 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 BCL7CQ8WUZ0 217 aaPredicted RBP25.33■■□□□ 1.65
PTPN4-207ENST00000460162 C8orf76Q96K31 380 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 TMEM175Q9BSA9 504 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 GBP3Q9H0R5 595 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 TMEM60Q9H2L4 133 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 UBN1Q9NPG3 1134 aa25.33■■□□□ 1.65
PTPN4-207ENST00000460162 TDRD15B5MCY1 1934 aaKnown RBP25.32■■□□□ 1.64
PTPN4-207ENST00000460162 CLASP2O75122 1294 aaKnown RBP25.32■■□□□ 1.64
PTPN4-207ENST00000460162 XRCC6P12956 609 aaKnown RBP eCLIP25.32■■□□□ 1.64
PTPN4-207ENST00000460162 MCM7P33993 719 aa25.32■■□□□ 1.64
PTPN4-207ENST00000460162 ARL2P36404 184 aa25.32■■□□□ 1.64
PTPN4-207ENST00000460162 MBTD1Q05BQ5 628 aa25.32■■□□□ 1.64
PTPN4-207ENST00000460162 NCBP1Q09161 790 aaKnown RBP25.32■■□□□ 1.64
PTPN4-207ENST00000460162 ASAP3Q8TDY4 903 aa25.32■■□□□ 1.64
PTPN4-207ENST00000460162 RPGRIP1Q96KN7 1286 aa25.32■■□□□ 1.64
PTPN4-207ENST00000460162 TUFT1Q9NNX1 390 aa25.32■■□□□ 1.64
PTPN4-207ENST00000460162 TECTAO75443 2155 aa25.31■■□□□ 1.64
PTPN4-207ENST00000460162 MUC6Q6W4X9 2439 aa25.31■■□□□ 1.64
PTPN4-207ENST00000460162 INO80B-WBP1J3KQ70 363 aa25.31■■□□□ 1.64
PTPN4-207ENST00000460162 B4GALT3O60512 393 aa25.31■■□□□ 1.64
PTPN4-207ENST00000460162 CXCL14O95715 111 aa25.31■■□□□ 1.64
PTPN4-207ENST00000460162 HMGN5P82970 282 aaKnown RBP25.31■■□□□ 1.64
PTPN4-207ENST00000460162 GUCY1B3Q02153 619 aa25.31■■□□□ 1.64
PTPN4-207ENST00000460162 ZNF280BQ86YH2 543 aa25.31■■□□□ 1.64
PTPN4-207ENST00000460162 SMG8Q8ND04 991 aaKnown RBP25.31■■□□□ 1.64
PTPN4-207ENST00000460162 PIGOQ8TEQ8 1089 aa25.31■■□□□ 1.64
PTPN4-207ENST00000460162 EDAQ92838 391 aa25.31■■□□□ 1.64
PTPN4-207ENST00000460162 FOXP1Q9H334 677 aaPredicted RBP25.31■■□□□ 1.64
PTPN4-207ENST00000460162 DZANK1Q9NVP4 752 aa25.31■■□□□ 1.64
PTPN4-207ENST00000460162 IPPQ9Y573 584 aa25.31■■□□□ 1.64
PTPN4-207ENST00000460162 ZNF318Q5VUA4 2279 aa25.3■■□□□ 1.64
PTPN4-207ENST00000460162 INPPL1O15357 1258 aa25.3■■□□□ 1.64
PTPN4-207ENST00000460162 USO1O60763 962 aaKnown RBP25.3■■□□□ 1.64
PTPN4-207ENST00000460162 ITGA4P13612 1032 aa25.3■■□□□ 1.64
PTPN4-207ENST00000460162 GLRA2P23416 452 aa25.3■■□□□ 1.64
PTPN4-207ENST00000460162 ITIH3Q06033 890 aa25.3■■□□□ 1.64
PTPN4-207ENST00000460162 ZSCAN31Q96LW9 406 aaPredicted RBP25.3■■□□□ 1.64
PTPN4-207ENST00000460162 NECTIN4Q96NY8 510 aa25.3■■□□□ 1.64
PTPN4-207ENST00000460162 FAM193BQ96PV7 902 aaPredicted RBP25.3■■□□□ 1.64
PTPN4-207ENST00000460162 CSRNP2Q9H175 543 aa25.3■■□□□ 1.64
PTPN4-207ENST00000460162 POLR3FQ9H1D9 316 aaPredicted RBP25.3■■□□□ 1.64
PTPN4-207ENST00000460162 SH2B1Q9NRF2 756 aaPredicted RBP25.3■■□□□ 1.64
PTPN4-207ENST00000460162 DDHD2O94830 711 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 OR52Z1P0C646 297 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 SPATA31C1P0DKV0 1188 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 ATP2B1P20020 1258 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 PTPN14Q15678 1187 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 AMHR2Q16671 573 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 CES5AQ6NT32 575 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 TMEM87AQ8NBN3 555 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 AUTS2Q8WXX7 1259 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 APOL5Q9BWW9 433 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 VN1R3Q9BXE9 311 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 EIF2AQ9BY44 585 aaKnown RBP25.29■■□□□ 1.64
PTPN4-207ENST00000460162 ADAM7Q9H2U9 754 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 DBR1Q9UK59 544 aaKnown RBP25.29■■□□□ 1.64
PTPN4-207ENST00000460162 ZMYM2Q9UBW7 1377 aa25.29■■□□□ 1.64
PTPN4-207ENST00000460162 POMCP01189 267 aa25.28■■□□□ 1.64
PTPN4-207ENST00000460162 CENPBP07199 599 aaPredicted RBP25.28■■□□□ 1.64
PTPN4-207ENST00000460162 AFF1P51825 1210 aaKnown RBP25.28■■□□□ 1.64
PTPN4-207ENST00000460162 HFE2Q6ZVN8 426 aa25.28■■□□□ 1.64
PTPN4-207ENST00000460162 CATSPER3Q86XQ3 398 aa25.28■■□□□ 1.64
PTPN4-207ENST00000460162 HACE1Q8IYU2 909 aa25.28■■□□□ 1.64
PTPN4-207ENST00000460162 MCPH1Q8NEM0 835 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms