RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 IP6K2Q9UHH9 426 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 DBNLQ9UJU6 430 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 PRPF3O43395 683 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 CCDC22O60826 627 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 PLA2G4BP0C869 781 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 SDC4P31431 198 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 GYG1P46976 350 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 BCAMP50895 628 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 PHKG1Q16816 387 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 PPP6R3Q5H9R7 873 aaPredicted RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 C1orf146Q5VVC0 180 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 NAA35Q5VZE5 725 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 VSTM4Q8IW00 320 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 PPHLN1Q8NEY8 458 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 SDR42E1Q8WUS8 393 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 CEP95Q96GE4 821 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 EMILIN3Q9NT22 766 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 HOXC10Q9NYD6 342 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 RSPH10B2B2RC85 870 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 TNPO2O14787 897 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 MMP1P03956 469 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 RSPH10BP0C881 870 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 PNMA6AP0CW24 399 aaPredicted RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 HPCAP84074 193 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 HABP4Q5JVS0 413 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 SLC30A9Q6PML9 568 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 DNAJC10Q8IXB1 793 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 ACRBPQ8NEB7 543 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 CEP72Q9P209 647 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 POLIQ9UNA4 740 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 EFCAB6Q5THR3 1501 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 TRAPPC3O43617 180 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 GADD45BO75293 160 aaPredicted RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 CD58P19256 250 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 EIF4A1P60842 406 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 AP1B1Q10567 949 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 SLC10A4Q96EP9 437 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 PITPNM3Q9BZ71 974 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 RPRD1BQ9NQG5 326 aaKnown RBP9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 NSMCE4AQ9NXX6 385 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 PCDHA5Q9Y5H7 936 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 CITO14578 2027 aa9.42□□□□□ -0.9
SHROOM4-203ENST00000460112 E7ENQ6 273 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 ALDH1A1P00352 501 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 NDUFA13Q9P0J0 144 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 PALD1Q9ULE6 856 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 PXDNLA1KZ92 1463 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 USP17L3A6NCW0 530 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 USP17L4A6NCW7 530 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 KIAA0391O15091 583 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 ZSCAN9O15535 394 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 IL6STP40189 918 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 ROR1Q01973 937 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 KIF23Q02241 960 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 PKN3Q6P5Z2 889 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 USP17L1Q7RTZ2 530 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 TRIM69Q86WT6 500 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 IMPDH2P12268 514 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 MTERF2Q49AM1 385 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 ZNF467Q7Z7K2 595 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 TBCKQ8TEA7 893 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 CXorf56Q9H5V9 222 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 TBK1Q9UHD2 729 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 RBL2Q08999 1139 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 SF3A3Q12874 501 aaKnown RBP eCLIP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 RASGRF1Q13972 1273 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 TMEM179Q6ZVK1 233 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 TBC1D1Q86TI0 1168 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 APOBEC3FQ8IUX4 373 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 C19orf60Q96EN9 201 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 CASS4Q9NQ75 786 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 PPARGC1AQ9UBK2 798 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 LSM7Q9UK45 103 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 BNIP3LO60238 219 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 ASNSP08243 561 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 KRT76Q01546 638 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 PDCLQ13371 301 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 KRR1Q13601 381 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 LAMC2Q13753 1193 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 MAPK6Q16659 721 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 APPL2Q8NEU8 664 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 UVRAGQ9P2Y5 699 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 FAM32AQ9Y421 112 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 ZNF711Q9Y462 761 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 ZNF235Q14590 738 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 CASP8Q14790 479 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 KCTD1Q719H9 257 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 GPIHBP1Q8IV16 184 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 B4GALNT2Q8NHY0 566 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 CLDN3O15551 220 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 WDR47O94967 919 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 PDE8BO95263 885 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 PDIA3P30101 505 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 DAB2P98082 770 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 TWF2Q6IBS0 349 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 EFL1Q7Z2Z2 1120 aaKnown RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 ELOA2Q8IYF1 753 aaPredicted RBP9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 ABCB11O95342 1321 aa9.41□□□□□ -0.9
SHROOM4-203ENST00000460112 NCKAP1LP55160 1127 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms