RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	ZNF576	Q9H609	170 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	CHST12	Q9NRB3	414 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	C1orf112	Q9NSG2	853 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	FAM105A	Q9NUU6	356 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	KBTBD4	Q9NVX7	518 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	TMEM161A	Q9NX61	479 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	ODF2L	Q9ULJ1	636 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	CNTNAP2	Q9UHC6	1331 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	FRMD3	A2A2Y4	597 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	CCDC169	A6NNP5	214 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	ABLIM1	O14639	778 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	B4GALT3	O60512	393 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	ERLIN2	O94905	339 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	MAPT	P10636	758 aa	Known RBP	11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	ZSCAN20	P17040	1043 aa	Predicted RBP	11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	LIG1	P18858	919 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	AFF1	P51825	1210 aa	Known RBP	11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	NDUFA8	P51970	172 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	NCKAP1L	P55160	1127 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	PPP2R5A	Q15172	486 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	TPRN	Q4KMQ1	711 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	PAN2	Q504Q3	1202 aa	Known RBP	11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	TWF2	Q6IBS0	349 aa	Known RBP	11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	GPR153	Q6NV75	609 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	AGMO	Q6ZNB7	445 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	SV2B	Q7L1I2	683 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	SFR1	Q86XK3	245 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	IFT74	Q96LB3	600 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	C17orf80	Q9BSJ5	609 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	ZBED2	Q9BTP6	218 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	C2orf40	Q9H1Z8	148 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	IKZF4	Q9H2S9	585 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	PDZD7	Q9H5P4	517 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	ELAC1	Q9H777	363 aa	Known RBP	11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	CERS4	Q9HA82	394 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	KMT5A	Q9NQR1	393 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	MTMR10	Q9NXD2	777 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	CHMP5	Q9NZZ3	219 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	SERTAD1	Q9UHV2	236 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	MSRA	Q9UJ68	235 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	KCNH3	Q9ULD8	1083 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	HES2	Q9Y543	173 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	PCDHB2	Q9Y5E7	798 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783	CHD9	Q3L8U1	2897 aa		11.32	□□□□□ -0.6
MRPL55-223	ENST00000459783		A0A1B0GUA9	196 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783		A0A1W2PQ27	194 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783		A0A1W2PQ64	194 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783		A0A1W2PQD8	194 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	RFXAP	O00287	272 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	ACKR2	O00590	384 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	ZNF623	O75123	536 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	NMT1	P30419	496 aa	Known RBP	11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	CASP5	P51878	434 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	DMP1	Q13316	513 aa	Predicted RBP	11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	MAPK6	Q16659	721 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	PPP2R2D	Q66LE6	453 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	LRRC55	Q6ZSA7	311 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	MRPL10	Q7Z7H8	261 aa	Known RBP	11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	ZBTB8OS	Q8IWT0	167 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	DEFB123	Q8N688	67 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	FSIP1	Q8NA03	581 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	RNF169	Q8NCN4	708 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	GLIS3	Q8NEA6	775 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	KCNN1	Q92952	543 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	HPS3	Q969F9	1004 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	PRIMPOL	Q96LW4	560 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	CASD1	Q96PB1	797 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	YME1L1	Q96TA2	773 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	STRA6	Q9BX79	667 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	TRIM9	Q9C026	710 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	HAPLN2	Q9GZV7	340 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	CXCL16	Q9H2A7	254 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	NXF3	Q9H4D5	531 aa	Known RBP	11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	TMEM134	Q9H6X4	195 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	C17orf75	Q9HAS0	396 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	SLC28A3	Q9HAS3	691 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	PARVG	Q9HBI0	331 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	PTPRH	Q9HD43	1115 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	FAM13B	Q9NYF5	915 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	IPP	Q9Y573	584 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	INSL6	Q9Y581	213 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	MRPL42	Q9Y6G3	142 aa	Known RBP	11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	PHLPP2	Q6ZVD8	1323 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	TCHH	Q07283	1943 aa		11.31	□□□□□ -0.6
MRPL55-223	ENST00000459783	TMEM265	A0A087WTH1	108 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	MEFV	O15553	781 aa	Predicted RBP	11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	LPXN	O60711	386 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	GADD45B	O75293	160 aa	Predicted RBP	11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	PPP1R37	O75864	691 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	FAM13A	O94988	1023 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	NPTXR	O95502	500 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	KRT18	P05783	430 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	AXL	P30530	894 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	EFNA5	P52803	228 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	ERVK-21	P61565	698 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	EHHADH	Q08426	723 aa		11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	PRPF4B	Q13523	1007 aa	Known RBP	11.3	□□□□□ -0.6
MRPL55-223	ENST00000459783	CUL4B	Q13620	913 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms