RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 SRGAP2CP0DJJ0 459 aa24.05■■□□□ 1.44
CPNE1-220ENST00000458038 SP100P23497 879 aaPredicted RBP24.05■■□□□ 1.44
CPNE1-220ENST00000458038 SLC11A1P49279 550 aa24.05■■□□□ 1.44
CPNE1-220ENST00000458038 LAMTOR4Q0VGL1 99 aa24.05■■□□□ 1.44
CPNE1-220ENST00000458038 TCF15Q12870 199 aa24.05■■□□□ 1.44
CPNE1-220ENST00000458038 LONRF3Q496Y0 759 aa24.05■■□□□ 1.44
CPNE1-220ENST00000458038 AGMOQ6ZNB7 445 aa24.05■■□□□ 1.44
CPNE1-220ENST00000458038 CABP7Q86V35 215 aa24.05■■□□□ 1.44
CPNE1-220ENST00000458038 GBP3Q9H0R5 595 aa24.05■■□□□ 1.44
CPNE1-220ENST00000458038 ZSWIM4Q9H7M6 989 aa24.05■■□□□ 1.44
CPNE1-220ENST00000458038 RSAD1Q9HA92 442 aa24.05■■□□□ 1.44
CPNE1-220ENST00000458038 MEIS3P2A8K0S8 358 aa24.04■■□□□ 1.44
CPNE1-220ENST00000458038 YWHABP31946 246 aaKnown RBP24.04■■□□□ 1.44
CPNE1-220ENST00000458038 TDRD5Q8NAT2 981 aaKnown RBP24.04■■□□□ 1.44
CPNE1-220ENST00000458038 AUTS2Q8WXX7 1259 aa24.04■■□□□ 1.44
CPNE1-220ENST00000458038 WASF1Q92558 559 aa24.04■■□□□ 1.44
CPNE1-220ENST00000458038 HAS1Q92839 578 aa24.04■■□□□ 1.44
CPNE1-220ENST00000458038 LXNQ9BS40 222 aa24.04■■□□□ 1.44
CPNE1-220ENST00000458038 DNAJB4Q9UDY4 337 aa24.04■■□□□ 1.44
CPNE1-220ENST00000458038 DBR1Q9UK59 544 aaKnown RBP24.04■■□□□ 1.44
CPNE1-220ENST00000458038 SSX2IPQ9Y2D8 614 aa24.04■■□□□ 1.44
CPNE1-220ENST00000458038 FAN1Q9Y2M0 1017 aa24.04■■□□□ 1.44
CPNE1-220ENST00000458038 EPCAMP16422 314 aa24.03■■□□□ 1.44
CPNE1-220ENST00000458038 NCLP19338 710 aaKnown RBP24.03■■□□□ 1.44
CPNE1-220ENST00000458038 AXLP30530 894 aa24.03■■□□□ 1.44
CPNE1-220ENST00000458038 HOXA11P31270 313 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-220ENST00000458038 NCBP1Q09161 790 aaKnown RBP24.03■■□□□ 1.44
CPNE1-220ENST00000458038 SCRN1Q12765 414 aa24.03■■□□□ 1.44
CPNE1-220ENST00000458038 MXD4Q14582 209 aaPredicted RBP24.03■■□□□ 1.44
CPNE1-220ENST00000458038 PTPN14Q15678 1187 aa24.03■■□□□ 1.44
CPNE1-220ENST00000458038 PIK3AP1Q6ZUJ8 805 aa24.03■■□□□ 1.44
CPNE1-220ENST00000458038 ZNF280BQ86YH2 543 aa24.03■■□□□ 1.44
CPNE1-220ENST00000458038 TMEM143Q96AN5 459 aa24.03■■□□□ 1.44
CPNE1-220ENST00000458038 CCDC51Q96ER9 411 aa24.03■■□□□ 1.44
CPNE1-220ENST00000458038 SFXN1Q9H9B4 322 aa24.03■■□□□ 1.44
CPNE1-220ENST00000458038 ZFHX2Q9C0A1 2572 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-220ENST00000458038 PFKFB2O60825 505 aa24.02■■□□□ 1.44
CPNE1-220ENST00000458038 ERLIN2O94905 339 aa24.02■■□□□ 1.44
CPNE1-220ENST00000458038 VCPP55072 806 aaKnown RBP24.02■■□□□ 1.44
CPNE1-220ENST00000458038 POU5F1BQ06416 359 aa24.02■■□□□ 1.44
CPNE1-220ENST00000458038 EMC2Q15006 297 aa24.02■■□□□ 1.44
CPNE1-220ENST00000458038 FERMT3Q86UX7 667 aa24.02■■□□□ 1.44
CPNE1-220ENST00000458038 C12orf76Q8N812 135 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-220ENST00000458038 ZNF579Q8NAF0 562 aaKnown RBP24.02■■□□□ 1.44
CPNE1-220ENST00000458038 RNF149Q8NC42 400 aa24.02■■□□□ 1.44
CPNE1-220ENST00000458038 BCL7CQ8WUZ0 217 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-220ENST00000458038 MINDY3Q9H8M7 445 aa24.02■■□□□ 1.44
CPNE1-220ENST00000458038 MRPL17Q9NRX2 175 aaKnown RBP24.02■■□□□ 1.44
CPNE1-220ENST00000458038 WRAP73Q9P2S5 460 aaPredicted RBP24.02■■□□□ 1.44
CPNE1-220ENST00000458038 DPP7Q9UHL4 492 aa24.02■■□□□ 1.44
CPNE1-220ENST00000458038 CDH22Q9UJ99 828 aa24.02■■□□□ 1.44
CPNE1-220ENST00000458038 USP34Q70CQ2 3546 aa24.02■■□□□ 1.44
CPNE1-220ENST00000458038 KLRC2P26717 231 aa24.01■■□□□ 1.43
CPNE1-220ENST00000458038 ANKRD1Q15327 319 aa24.01■■□□□ 1.43
CPNE1-220ENST00000458038 XKR9Q5GH70 373 aa24.01■■□□□ 1.43
CPNE1-220ENST00000458038 ELMSAN1Q6PJG2 1045 aa24.01■■□□□ 1.43
CPNE1-220ENST00000458038 GPR149Q86SP6 731 aa24.01■■□□□ 1.43
CPNE1-220ENST00000458038 ACSF2Q96CM8 615 aaPredicted RBP24.01■■□□□ 1.43
CPNE1-220ENST00000458038 BRMS1Q9HCU9 246 aa24.01■■□□□ 1.43
CPNE1-220ENST00000458038 DDHD2O94830 711 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 BRD1O95696 1058 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 UBXN11Q5T124 520 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 NCAPH2Q6IBW4 605 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 C15orf39Q6ZRI6 1047 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 OTOP3Q7RTS5 596 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 KLHL5Q96PQ7 755 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 MTRQ99707 1265 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 VN1R3Q9BXE9 311 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 RGL1Q9NZL6 768 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 LIMD1Q9UGP4 676 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 ARID2Q68CP9 1835 aa24■■□□□ 1.43
CPNE1-220ENST00000458038 SPDYE4A6NLX3 237 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 NRP1O14786 923 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 INPPL1O15357 1258 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 ST18O60284 1047 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 LILRB3O75022 631 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 CNPP09543 421 aaKnown RBP23.99■■□□□ 1.43
CPNE1-220ENST00000458038 WEE2P0C1S8 567 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 ITGA4P13612 1032 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 CLCN4P51793 760 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 PTENP60484 403 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 SPIRE1Q08AE8 756 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 TFDP1Q14186 410 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 NOTUMQ6P988 496 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 TMC5Q6UXY8 1006 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 CYP26C1Q6V0L0 522 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 IFNLR1Q8IU57 520 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-220ENST00000458038 OXER1Q8TDS5 423 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 DYDC2Q96IM9 177 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 PHOX2BQ99453 314 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 ORC3Q9UBD5 711 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-220ENST00000458038 PCDHA12Q9UN75 941 aa23.99■■□□□ 1.43
CPNE1-220ENST00000458038 PTPRZ1P23471 2315 aaPredicted RBP23.99■■□□□ 1.43
CPNE1-220ENST00000458038 DENND4AQ7Z401 1863 aa23.98■■□□□ 1.43
CPNE1-220ENST00000458038 B4GALT3O60512 393 aa23.98■■□□□ 1.43
CPNE1-220ENST00000458038 NR1I2O75469 434 aa23.98■■□□□ 1.43
CPNE1-220ENST00000458038 LYPLA2O95372 231 aa23.98■■□□□ 1.43
CPNE1-220ENST00000458038 SOD2P04179 222 aa23.98■■□□□ 1.43
CPNE1-220ENST00000458038 ANAPC15P60006 121 aa23.98■■□□□ 1.43
CPNE1-220ENST00000458038 CCDC149Q6ZUS6 474 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms