RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 VWA3BQ502W6 1294 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 HSP90AA4PQ58FG1 418 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 FIGNQ5HY92 759 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 ZPBP2Q6X784 338 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 INTS8Q75QN2 995 aaKnown RBP9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 TRMT1LQ7Z2T5 733 aaKnown RBP9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 TMC6Q7Z403 805 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 LINC01465Q8N7H1 131 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 XXYLT1Q8NBI6 393 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 CCDC112Q8NEF3 446 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 RAET1EQ8TD07 263 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 BSNDQ8WZ55 320 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 TMEM143Q96AN5 459 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 CCDC51Q96ER9 411 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 ERGIC2Q96RQ1 377 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 MAP7D2Q96T17 732 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 SH2D3AQ9BRG2 576 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 NUP58Q9BVL2 599 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 NDST4Q9H3R1 872 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 RNPEPQ9H4A4 650 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 TAB2Q9NYJ8 693 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 GABRQQ9UN88 632 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 DAAM1Q9Y4D1 1078 aa9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.76□□□□□ -0.85
CDC42EP3-204ENST00000457889 GTPBP10A4D1E9 387 aaKnown RBP9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 MBLAC1A4D2B0 266 aaPredicted RBP9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 K7ERI5 159 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 HNRNPDLO14979 420 aaKnown RBP9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 STX10O60499 249 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 CNGA1P29973 690 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 HOXC8P31273 242 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 PHKA2P46019 1235 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 PURAQ00577 322 aaKnown RBP9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 UBXN1Q04323 297 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 KCNA1Q09470 495 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 LAMTOR4Q0VGL1 99 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 CAPSQ13938 189 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 MFSD10Q14728 455 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 MIIPQ5JXC2 388 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 PRAMEF19Q5SWL8 479 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 TMEM63BQ5T3F8 832 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 EFCAB12Q6NXP0 572 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 ARMCX5Q6P1M9 558 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 MTHFD1LQ6UB35 978 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 ZNF410Q86VK4 478 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 PPFIBP1Q86W92 1011 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 CNGA4Q8IV77 575 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 PLPP6Q8IY26 295 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 FAM186BQ8IYM0 893 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 SPC24Q8NBT2 197 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 CD99L2Q8TCZ2 262 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 ASAP3Q8TDY4 903 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 PRPF31Q8WWY3 499 aaKnown RBP9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 PRIMPOLQ96LW4 560 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 MTG1Q9BT17 334 aaPredicted RBP9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 PLA2G2EQ9NZK7 142 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 SUCLA2Q9P2R7 463 aaPredicted RBP9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 STYXL1Q9Y6J8 313 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 SIP14410 1827 aa9.75□□□□□ -0.85
CDC42EP3-204ENST00000457889 SMIM35A0A1B0GVV1 85 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 PES1O00541 588 aaKnown RBP9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 PMM2O15305 246 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 P4HA2O15460 535 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 EXOC3O60645 756 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 N4BP1O75113 896 aaKnown RBP9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 CABYRO75952 493 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 AKAP3O75969 853 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 LDHAP00338 332 aaKnown RBP9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 SMIM10L2AP0DMW4 78 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 SMIM10L2BP0DMW5 78 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 KRT13P13646 458 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 HSPA6P17066 643 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 KLRC1P26715 233 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 KCNJ6P48051 423 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 LIG4P49917 911 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 PTENP60484 403 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 CACNB2Q08289 660 aaPredicted RBP9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 TBX2Q13207 712 aaPredicted RBP9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 MAPK6Q16659 721 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 FAM187BQ17R55 369 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 KIAA0753Q2KHM9 967 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 CEP135Q66GS9 1140 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 TAF2Q6P1X5 1199 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 ZSCAN30Q86W11 494 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 CREBRFQ8IUR6 639 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 METTL13Q8N6R0 699 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 PCSK9Q8NBP7 692 aaKnown RBP9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 TRPV1Q8NER1 839 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 KAT2BQ92831 832 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 BICD1Q96G01 975 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 FBXL18Q96ME1 805 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 NAA15Q9BXJ9 866 aaKnown RBP9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 MRPL4Q9BYD3 311 aaKnown RBP9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 SEZ6LQ9BYH1 1024 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 EDEM3Q9BZQ6 932 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 CCDC113Q9H0I3 377 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 VPS16Q9H269 839 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 SUGCTQ9HAC7 445 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 POLD4Q9HCU8 107 aa9.74□□□□□ -0.85
CDC42EP3-204ENST00000457889 PRMT7Q9NVM4 692 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms