RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 ENO3P13929 434 aaPredicted RBP13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 SLC18A3Q16572 532 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 CCDC103Q8IW40 242 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 KCTD6Q8NC69 237 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 EYA3Q99504 573 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 ERP44Q9BS26 406 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 SENP1Q9P0U3 644 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 TRIM33Q9UPN9 1127 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 FTLP02792 175 aaPredicted RBP13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 MYCLP12524 364 aaPredicted RBP13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 DDR1Q08345 913 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 INAQ16352 499 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 UNC13DQ70J99 1090 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 KRT28Q7Z3Y7 464 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 BEGAINQ9BUH8 593 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 ITSN2Q9NZM3 1697 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 SMAPO00193 183 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 HNRNPRO43390 633 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 DLGAP3O95886 979 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 FAM153BP0C7A2 387 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 PLA2G4BP0C869 781 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 KLRC1P26715 233 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 OTUD4Q01804 1114 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 AOC3Q16853 763 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 FAM153CQ494X1 144 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 TAF1BQ53T94 588 aaPredicted RBP13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 SLFN12Q8IYM2 578 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 TSEN2Q8NCE0 465 aaKnown RBP13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 SEPT8Q92599 483 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 HPS3Q969F9 1004 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 FAM96AQ9H5X1 160 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 RXFP1Q9HBX9 757 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 FAM153AQ9UHL3 310 aa13.11□□□□□ -0.31
NEDD4L-208ENST00000456173 AKAP10O43572 662 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 TJP3O95049 919 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 GRIN1Q05586 938 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 OASLQ15646 514 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 TTMPQ5BVD1 217 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 DNAJC24Q6P3W2 148 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 STOX1Q6ZVD7 989 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 DDI1Q8WTU0 396 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 STK32AQ8WU08 396 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 RFFLQ8WZ73 363 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 KCNB2Q92953 911 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 DCAF5Q96JK2 942 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 RBM15Q96T37 977 aaKnown RBP eCLIP13.1□□□□□ -0.316e-14■■■■□ 26.6
NEDD4L-208ENST00000456173 ALDH8A1Q9H2A2 487 aaPredicted RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 RNPEPQ9H4A4 650 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 SEPT3Q9UH03 358 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 MTO1Q9Y2Z2 717 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 ABCA8O94911 1581 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 M0R3G1 203 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 AIM2O14862 343 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 PDE8AO60658 829 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 BCAMP50895 628 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 TRIM60Q495X7 471 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 TRIM67Q6ZTA4 783 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 CYB5R4Q7L1T6 521 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 GPR141Q7Z602 305 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 YTHDF3Q7Z739 585 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 PATL1Q86TB9 770 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 COL23A1Q86Y22 540 aaPredicted RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 FBXL13Q8NEE6 735 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 ZNF564Q8TBZ8 553 aaPredicted RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 PRPF18Q99633 342 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 PABPC3Q9H361 631 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 ZWILCHQ9H900 591 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 PARVBQ9HBI1 364 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 CFAP65Q6ZU64 1925 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 KCNJ1P48048 391 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 SFSWAPQ12872 951 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 HABP4Q5JVS0 413 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 CAVIN3Q969G5 261 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 MAML3Q96JK9 1138 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 KCNK16Q96T55 309 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 DCUN1D5Q9BTE7 237 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 NUP85Q9BW27 656 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 OSBPL8Q9BZF1 889 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 THRAP3Q9Y2W1 955 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 ETS2P15036 469 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 CALB2P22676 271 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 EPHB2P29323 1055 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 MTDHQ86UE4 582 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 ATP11CQ8NB49 1132 aa13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 TMA16Q96EY4 203 aaKnown RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 ROPN1BQ9BZX4 212 aaPredicted RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 ROPN1Q9HAT0 212 aaPredicted RBP13.1□□□□□ -0.31
NEDD4L-208ENST00000456173 RPS6KA3P51812 740 aa13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 TMTC4Q5T4D3 741 aa13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 PARVGQ9HBI0 331 aa13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 ABCF3Q9NUQ8 709 aa13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 APPL1Q9UKG1 709 aa13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 SYNJ2BP-COX16A0A087WUM0 186 aa13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 PHF2O75151 1096 aa13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 OCM2P0CE71 109 aa13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 OCMP0CE72 109 aaPredicted RBP13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 MXI1P50539 228 aa13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 KCNJ2P63252 427 aa13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 UBE3AQ05086 875 aa13.09□□□□□ -0.31
NEDD4L-208ENST00000456173 USP4Q13107 963 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms