RNA–Protein interactions for RNA: ENST00000455954.2

CHCHD4P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3, humanhuman

BASIC

Gene CHCHD4P3, Length 410 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4P3-201ENST00000455954 SLC8A3P57103 927 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SKIDA1Q1XH10 827 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KIAA0753Q2KHM9 967 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 LETM2Q2VYF4 491 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FAM26FQ5R3K3 315 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 VPS36Q86VN1 386 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CCDC65Q8IXS2 484 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SPICE1Q8N0Z3 855 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 REXO1Q8N1G1 1221 aaKnown RBP10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TBC1D5Q92609 795 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PSMB7Q99436 277 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NAP1L3Q99457 506 aaPredicted RBP10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PLIN2Q99541 437 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NUDT12Q9BQG2 462 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TMEM109Q9BVC6 243 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MOV10L1Q9BXT6 1211 aaKnown RBP10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 OSBPL7Q9BZF2 842 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NT5C3AQ9H0P0 336 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 BATF3Q9NR55 127 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 IL17RBQ9NRM6 502 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 STXBP5LQ9Y2K9 1186 aa10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.86□□□□□ -0.67
CHCHD4P3-201ENST00000455954 IGKV6D-41A0A0C4DH26 115 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SMCO2A6NFE2 343 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FLOT1O75955 427 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FTCDO95954 541 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TSPY3P0CV98 308 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TSPY8P0CW00 308 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CCL5P13501 91 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ELNP15502 786 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 EN2P19622 333 aaPredicted RBP10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 DSG3P32926 999 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TECP42680 631 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SEC24CP53992 1094 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 DRG2P55039 364 aaKnown RBP10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 POLR2FP61218 127 aaKnown RBP10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 COASYQ13057 564 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 BYSLQ13895 437 aaKnown RBP10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MTFR1Q15390 333 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SLC35G1Q2M3R5 365 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TMC3Q7Z5M5 1100 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 GPR142Q7Z601 462 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FRMD5Q7Z6J6 570 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PLEKHH3Q7Z736 793 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ANKS4BQ8N8V4 417 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CCDC197Q8NCU1 140 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NEDD1Q8NHV4 660 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SOCS4Q8WXH5 440 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CCT6BQ92526 530 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RAPGEF5Q92565 580 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MKL1Q969V6 931 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 DNAJC19Q96DA6 116 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PGM2Q96G03 612 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 XPO6Q96QU8 1125 aaKnown RBP10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TXLNGYQ9BZA5 131 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 STMN4Q9H169 189 aaPredicted RBP10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PORCNQ9H237 461 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RABEP2Q9H5N1 569 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 BTBD7Q9P203 1132 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SEC63Q9UGP8 760 aaKnown RBP10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SUFUQ9UMX1 484 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NOC2LQ9Y3T9 749 aaKnown RBP10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 STK24Q9Y6E0 443 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PLIN4Q96Q06 1357 aa10.85□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NCANO14594 1321 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 A0A087X0T9 212 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ESYT3A0FGR9 886 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ZSCAN5CA6NGD5 496 aaPredicted RBP10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CCT8L1PA6NM43 557 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KLRF2D3W0D1 207 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 F5H6K3 240 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 F8VZ95 297 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KCNK3O14649 394 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RAD21O60216 631 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TTLL1O95922 423 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 INHAP05111 366 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 FAM228BP0C875 321 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 XRCC5P13010 732 aaKnown RBP10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CYP2B6P20813 491 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CALRP27797 417 aaKnown RBP10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KLRC3Q07444 240 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 RAPGEF1Q13905 1077 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ERMARDQ5T6L9 678 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TLDC1Q6P9B6 456 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 BTNL9Q6UXG8 535 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 KLHL7Q8IXQ5 586 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MAB21L3Q8N8X9 362 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TPCN2Q8NHX9 752 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TBCKQ8TEA7 893 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 SNX29Q8TEQ0 813 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 DDX12PQ92771 950 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 MIEF2Q96C03 454 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 HVCN1Q96D96 273 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CHMP6Q96FZ7 201 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 CEP95Q96GE4 821 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 ANKRD27Q96NW4 1050 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 TMEM47Q9BQJ4 181 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 PLCD4Q9BRC7 762 aa10.84□□□□□ -0.67
CHCHD4P3-201ENST00000455954 NSRP1Q9H0G5 558 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms