RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 TRIM22Q8IYM9 498 aa20.93■□□□□ 0.94
MSH6-206ENST00000455383 CMASQ8NFW8 434 aaPredicted RBP20.93■□□□□ 0.94
MSH6-206ENST00000455383 URGCPQ8TCY9 931 aa20.93■□□□□ 0.94
MSH6-206ENST00000455383 DHX33Q9H6R0 707 aaKnown RBP20.93■□□□□ 0.94
MSH6-206ENST00000455383 RSAD1Q9HA92 442 aa20.93■□□□□ 0.94
MSH6-206ENST00000455383 KANSL3Q9P2N6 904 aa20.93■□□□□ 0.94
MSH6-206ENST00000455383 VAV3Q9UKW4 847 aa20.93■□□□□ 0.94
MSH6-206ENST00000455383 PPME1Q9Y570 386 aa20.93■□□□□ 0.94
MSH6-206ENST00000455383 COL4A3BPQ9Y5P4 624 aa20.93■□□□□ 0.94
MSH6-206ENST00000455383 CNTNAP2Q9UHC6 1331 aa20.93■□□□□ 0.94
MSH6-206ENST00000455383 PTPRZ1P23471 2315 aaPredicted RBP20.93■□□□□ 0.94
MSH6-206ENST00000455383 SLC37A4O43826 429 aa20.92■□□□□ 0.94
MSH6-206ENST00000455383 DEXIO95424 95 aa20.92■□□□□ 0.94
MSH6-206ENST00000455383 EFEMP2O95967 443 aa20.92■□□□□ 0.94
MSH6-206ENST00000455383 ALDH2P05091 517 aa20.92■□□□□ 0.94
MSH6-206ENST00000455383 KLRC2P26717 231 aa20.92■□□□□ 0.94
MSH6-206ENST00000455383 QARSP47897 775 aaKnown RBP20.92■□□□□ 0.94
MSH6-206ENST00000455383 NPEPPSP55786 919 aa20.92■□□□□ 0.94
MSH6-206ENST00000455383 SSRP1Q08945 709 aaKnown RBP20.92■□□□□ 0.94
MSH6-206ENST00000455383 TOB2Q14106 344 aaPredicted RBP20.92■□□□□ 0.94
MSH6-206ENST00000455383 ZNF579Q8NAF0 562 aaKnown RBP20.92■□□□□ 0.94
MSH6-206ENST00000455383 RHOBTB2Q9BYZ6 727 aa20.92■□□□□ 0.94
MSH6-206ENST00000455383 MFSD1Q9H3U5 465 aa20.92■□□□□ 0.94
MSH6-206ENST00000455383 MINDY3Q9H8M7 445 aa20.92■□□□□ 0.94
MSH6-206ENST00000455383 DDX25Q9UHL0 483 aaKnown RBP20.92■□□□□ 0.94
MSH6-206ENST00000455383 DUSP12Q9UNI6 340 aa20.92■□□□□ 0.94
MSH6-206ENST00000455383 FAN1Q9Y2M0 1017 aa20.92■□□□□ 0.94
MSH6-206ENST00000455383 NRP1O14786 923 aa20.91■□□□□ 0.94
MSH6-206ENST00000455383 INPPL1O15357 1258 aa20.91■□□□□ 0.94
MSH6-206ENST00000455383 NCLP19338 710 aaKnown RBP20.91■□□□□ 0.94
MSH6-206ENST00000455383 AOC1P19801 751 aa20.91■□□□□ 0.94
MSH6-206ENST00000455383 NONOQ15233 471 aaKnown RBP eCLIP20.91■□□□□ 0.94
MSH6-206ENST00000455383 LETM2Q2VYF4 491 aa20.91■□□□□ 0.94
MSH6-206ENST00000455383 EXOC8Q8IYI6 725 aa20.91■□□□□ 0.94
MSH6-206ENST00000455383 RNF168Q8IYW5 571 aaPredicted RBP20.91■□□□□ 0.94
MSH6-206ENST00000455383 PRPF31Q8WWY3 499 aaKnown RBP20.91■□□□□ 0.94
MSH6-206ENST00000455383 SLC7A3Q8WY07 619 aa20.91■□□□□ 0.94
MSH6-206ENST00000455383 FAM20AQ96MK3 541 aa20.91■□□□□ 0.94
MSH6-206ENST00000455383 KCNK12Q9HB15 430 aa20.91■□□□□ 0.94
MSH6-206ENST00000455383 KCNMB3Q9NPA1 279 aa20.91■□□□□ 0.94
MSH6-206ENST00000455383 MRPL17Q9NRX2 175 aaKnown RBP20.91■□□□□ 0.94
MSH6-206ENST00000455383 MARCH5Q9NX47 278 aa20.91■□□□□ 0.94
MSH6-206ENST00000455383 WRAP73Q9P2S5 460 aaPredicted RBP20.91■□□□□ 0.94
MSH6-206ENST00000455383 C2orf16Q68DN1 1984 aa20.9■□□□□ 0.94
MSH6-206ENST00000455383 PI15O43692 258 aa20.9■□□□□ 0.94
MSH6-206ENST00000455383 DKC1O60832 514 aaKnown RBP eCLIP20.9■□□□□ 0.94
MSH6-206ENST00000455383 PAPLNO95428 1278 aa20.9■□□□□ 0.94
MSH6-206ENST00000455383 SOD2P04179 222 aa20.9■□□□□ 0.94
MSH6-206ENST00000455383 P4HBP07237 508 aaKnown RBP20.9■□□□□ 0.94
MSH6-206ENST00000455383 RFC5P40937 340 aa20.9■□□□□ 0.94
MSH6-206ENST00000455383 PSPC1Q8WXF1 523 aaKnown RBP20.9■□□□□ 0.94
MSH6-206ENST00000455383 CEP170P1Q96L14 293 aa20.9■□□□□ 0.94
MSH6-206ENST00000455383 HERC2P3Q9BVR0 1158 aa20.9■□□□□ 0.94
MSH6-206ENST00000455383 ZSWIM6Q9HCJ5 1215 aa20.9■□□□□ 0.94
MSH6-206ENST00000455383 IGSF9Q9P2J2 1179 aa20.9■□□□□ 0.94
MSH6-206ENST00000455383 RIF1Q5UIP0 2472 aaKnown RBP20.89■□□□□ 0.94
MSH6-206ENST00000455383 N4BP1O75113 896 aaKnown RBP20.89■□□□□ 0.93
MSH6-206ENST00000455383 SSBP05455 408 aaKnown RBP eCLIP20.89■□□□□ 0.93
MSH6-206ENST00000455383 FOXK2Q01167 660 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 LAMTOR4Q0VGL1 99 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 INF2Q27J81 1249 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 CYP26C1Q6V0L0 522 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 RUFY3Q7L099 469 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 KRT25Q7Z3Z0 450 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 FRMD5Q7Z6J6 570 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 C4orf19Q8IY42 314 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 CCDC105Q8IYK2 499 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 COLGALT2Q8IYK4 626 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 SMG8Q8ND04 991 aaKnown RBP20.89■□□□□ 0.93
MSH6-206ENST00000455383 CNNM3Q8NE01 707 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 FLCNQ8NFG4 579 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 TMEM143Q96AN5 459 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 ZNF274Q96GC6 653 aaPredicted RBP20.89■□□□□ 0.93
MSH6-206ENST00000455383 AIFM3Q96NN9 605 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 FAM193BQ96PV7 902 aaPredicted RBP20.89■□□□□ 0.93
MSH6-206ENST00000455383 RPS6KC1Q96S38 1066 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 FAM186AA6NE01 2351 aa20.89■□□□□ 0.93
MSH6-206ENST00000455383 POMCP01189 267 aa20.88■□□□□ 0.93
MSH6-206ENST00000455383 SRGAP2CP0DJJ0 459 aa20.88■□□□□ 0.93
MSH6-206ENST00000455383 KIAA0319Q5VV43 1072 aa20.88■□□□□ 0.93
MSH6-206ENST00000455383 PPP4R3AQ6IN85 833 aa20.88■□□□□ 0.93
MSH6-206ENST00000455383 TAS1R1Q7RTX1 841 aa20.88■□□□□ 0.93
MSH6-206ENST00000455383 NKD2Q969F2 451 aaPredicted RBP20.88■□□□□ 0.93
MSH6-206ENST00000455383 RXFP1Q9HBX9 757 aa20.88■□□□□ 0.93
MSH6-206ENST00000455383 UBN1Q9NPG3 1134 aa20.88■□□□□ 0.93
MSH6-206ENST00000455383 SSX2IPQ9Y2D8 614 aa20.88■□□□□ 0.93
MSH6-206ENST00000455383 ASAP2O43150 1006 aa20.87■□□□□ 0.93
MSH6-206ENST00000455383 GAS2O43903 313 aaKnown RBP20.87■□□□□ 0.93
MSH6-206ENST00000455383 URODP06132 367 aa20.87■□□□□ 0.93
MSH6-206ENST00000455383 DSC1Q08554 894 aa20.87■□□□□ 0.93
MSH6-206ENST00000455383 FERMT3Q86UX7 667 aa20.87■□□□□ 0.93
MSH6-206ENST00000455383 RTP3Q9BQQ7 232 aa20.87■□□□□ 0.93
MSH6-206ENST00000455383 WDR6Q9NNW5 1121 aaKnown RBP20.87■□□□□ 0.93
MSH6-206ENST00000455383 MAN1C1Q9NR34 630 aa20.87■□□□□ 0.93
MSH6-206ENST00000455383 VPS13AQ96RL7 3174 aa20.87■□□□□ 0.93
MSH6-206ENST00000455383 SPDYE4A6NLX3 237 aa20.86■□□□□ 0.93
MSH6-206ENST00000455383 TBX3O15119 743 aa20.86■□□□□ 0.93
MSH6-206ENST00000455383 TEX28O15482 410 aa20.86■□□□□ 0.93
MSH6-206ENST00000455383 EPB41L2O43491 1005 aaKnown RBP20.86■□□□□ 0.93
MSH6-206ENST00000455383 C1RP00736 705 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms