RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 WDR44Q5JSH3 913 aa12.93□□□□□ -0.34
SMPD4-213ENST00000454468 C7orf43Q8WVR3 580 aa12.93□□□□□ -0.34
SMPD4-213ENST00000454468 ZIM3Q96PE6 472 aa12.93□□□□□ -0.34
SMPD4-213ENST00000454468 CAPS2Q9BXY5 557 aa12.93□□□□□ -0.34
SMPD4-213ENST00000454468 OLFML3Q9NRN5 406 aa12.93□□□□□ -0.34
SMPD4-213ENST00000454468 PPP1R9AQ9ULJ8 1098 aa12.93□□□□□ -0.34
SMPD4-213ENST00000454468 PLAAQ9Y263 795 aa12.93□□□□□ -0.34
SMPD4-213ENST00000454468 ANKRD63C9JTQ0 380 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 KCNJ1P48048 391 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 PPP2R5CQ13362 524 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 SEL1L2Q5TEA6 688 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 NT5C1BQ96P26 610 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 PDCD2LQ9BRP1 358 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 HEMGNQ9BXL5 484 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 AGO4Q9HCK5 861 aaKnown RBP12.92□□□□□ -0.34
SMPD4-213ENST00000454468 TELO2Q9Y4R8 837 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 PCDHA10Q9Y5I2 948 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 KRT19P08727 400 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 PLS3P13797 630 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 CCND2P30279 289 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 PDE6CP51160 858 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 PPFIA1Q13136 1202 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 MEI1Q5TIA1 1274 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 USP38Q8NB14 1042 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 RIT2Q99578 217 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 AGPAT1Q99943 283 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 TBC1D22BQ9NU19 505 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 CYP3A4P08684 503 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 PLCB3Q01970 1234 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 PGM5Q15124 567 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 COBLL1Q53SF7 1204 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 KAZNQ674X7 775 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 SCARA5Q6ZMJ2 495 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 CAPN12Q6ZSI9 719 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 SLC47A2Q86VL8 602 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 MMGT1Q8N4V1 131 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 SEL1LQ9UBV2 794 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 ODF2LQ9ULJ1 636 aa12.92□□□□□ -0.34
SMPD4-213ENST00000454468 LOC102724159A0A0B4J2E5 919 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 TARSL2A2RTX5 802 aaKnown RBP12.91□□□□□ -0.34
SMPD4-213ENST00000454468 MYH7BA7E2Y1 1941 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 TRIM66O15016 1216 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 SLC16A3O15427 465 aaKnown RBP12.91□□□□□ -0.34
SMPD4-213ENST00000454468 PWP2Q15269 919 aaKnown RBP12.91□□□□□ -0.34
SMPD4-213ENST00000454468 UBL4BQ8N7F7 174 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 AGBL3Q8NEM8 1001 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 LNX1Q8TBB1 728 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-213ENST00000454468 TAS1R2Q8TE23 839 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 CPA5Q8WXQ8 436 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 ATP6V0A1Q93050 837 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 ASIC3Q9UHC3 531 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 RBAK-RBAKDNI3L0D1 243 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 NOP56O00567 594 aaKnown RBP12.91□□□□□ -0.34
SMPD4-213ENST00000454468 NPTX2P47972 431 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 GUCY1A3Q02108 690 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 CNTN2Q02246 1040 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 DAB2IPQ5VWQ8 1189 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 SPOPLQ6IQ16 392 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 ZNF280CQ8ND82 737 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 RNPC3Q96LT9 517 aaKnown RBP12.91□□□□□ -0.34
SMPD4-213ENST00000454468 POLR3FQ9H1D9 316 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-213ENST00000454468 C1orf112Q9NSG2 853 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 PIK3CDO00329 1044 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 MMEP08473 750 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 TMOD1P28289 359 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 PIK3CAP42336 1068 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 ASTE1Q2TB18 679 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-213ENST00000454468 GNPTABQ3T906 1256 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 GSTA5Q7RTV2 222 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 DAW1Q8N136 415 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 NSUN6Q8TEA1 469 aaKnown RBP12.91□□□□□ -0.34
SMPD4-213ENST00000454468 SYN2Q92777 582 aaPredicted RBP12.91□□□□□ -0.34
SMPD4-213ENST00000454468 TATDN2Q93075 761 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.91□□□□□ -0.341e-6■■■□□ 15.9
SMPD4-213ENST00000454468 AS3MTQ9HBK9 375 aa12.91□□□□□ -0.34
SMPD4-213ENST00000454468 EIF3DO15371 548 aaKnown RBP eCLIP12.9□□□□□ -0.34
SMPD4-213ENST00000454468 KIAA0754O94854 1291 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 MYZAPP0CAP1 466 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 MFAP3P55082 362 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 ALG6Q9Y672 507 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 IGSF9BQ9UPX0 1349 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 E7EVH7 732 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 K7ERI5 159 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 EBAG9O00559 213 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 CSDE1O75534 798 aaKnown RBP12.9□□□□□ -0.34
SMPD4-213ENST00000454468 SYF2O95926 243 aaKnown RBP12.9□□□□□ -0.34
SMPD4-213ENST00000454468 CCNE2O96020 404 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 CD19P15391 556 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 LLGL2Q6P1M3 1020 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 USP37Q86T82 979 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 CPNE8Q86YQ8 564 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 MICALL1Q8N3F8 863 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 RFFLQ8WZ73 363 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 MBOAT7Q96N66 472 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 KLHL11Q9NVR0 708 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 CNTNAP1P78357 1384 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 FRMPD4Q14CM0 1322 aa12.9□□□□□ -0.34
SMPD4-213ENST00000454468 VWA5AO00534 786 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms