RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 PARVGQ9HBI0 331 aa30.86■■■□□ 2.53
SMARCC1-203ENST00000454240 LRFN2Q9ULH4 789 aa30.86■■■□□ 2.53
SMARCC1-203ENST00000454240 COL4A6Q14031 1691 aa30.86■■■□□ 2.53
SMARCC1-203ENST00000454240 TMEM265A0A087WTH1 108 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 LCHNA4D1U4 455 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 K7ERI5 159 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 ACKR2O00590 384 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 FAM13AO94988 1023 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 PRKCBP05771 671 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 CA3P07451 260 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 SMTNP53814 917 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 UBXN11Q5T124 520 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 NOTUMQ6P988 496 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 ZNF598Q86UK7 904 aaKnown RBP30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 SP7Q8TDD2 431 aaPredicted RBP30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 CCDC51Q96ER9 411 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 CPB2Q96IY4 423 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 YME1L1Q96TA2 773 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 MAGEF1Q9HAY2 307 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 FAM105AQ9NUU6 356 aa30.85■■■□□ 2.53
SMARCC1-203ENST00000454240 CNTNAP2Q9UHC6 1331 aa30.84■■■□□ 2.53
SMARCC1-203ENST00000454240 A0A1B0GUA9 196 aa30.84■■■□□ 2.53
SMARCC1-203ENST00000454240 SLC16A4O15374 487 aa30.84■■■□□ 2.53
SMARCC1-203ENST00000454240 ZNF623O75123 536 aa30.84■■■□□ 2.53
SMARCC1-203ENST00000454240 TBCAO75347 108 aaKnown RBP30.84■■■□□ 2.53
SMARCC1-203ENST00000454240 EOMESO95936 686 aa30.84■■■□□ 2.53
SMARCC1-203ENST00000454240 MYCT1Q8N699 235 aa30.84■■■□□ 2.53
SMARCC1-203ENST00000454240 TMEM161BQ8NDZ6 487 aa30.84■■■□□ 2.53
SMARCC1-203ENST00000454240 STAMQ92783 540 aa30.84■■■□□ 2.53
SMARCC1-203ENST00000454240 KCNN1Q92952 543 aa30.84■■■□□ 2.53
SMARCC1-203ENST00000454240 LRRC27Q9C0I9 530 aa30.84■■■□□ 2.53
SMARCC1-203ENST00000454240 PHLPP2Q6ZVD8 1323 aa30.83■■■□□ 2.53
SMARCC1-203ENST00000454240 TTLL13PA6NNM8 815 aa30.83■■■□□ 2.53
SMARCC1-203ENST00000454240 EDN1P05305 212 aa30.83■■■□□ 2.53
SMARCC1-203ENST00000454240 SKIP12755 728 aa30.83■■■□□ 2.53
SMARCC1-203ENST00000454240 ATF7P17544 494 aaPredicted RBP30.83■■■□□ 2.53
SMARCC1-203ENST00000454240 NCKAP1LP55160 1127 aa30.83■■■□□ 2.53
SMARCC1-203ENST00000454240 TAS1R3Q7RTX0 852 aa30.83■■■□□ 2.53
SMARCC1-203ENST00000454240 SLC28A3Q9HAS3 691 aa30.83■■■□□ 2.53
SMARCC1-203ENST00000454240 ARHGEF15O94989 841 aa30.82■■■□□ 2.52
SMARCC1-203ENST00000454240 IBSPP21815 317 aaPredicted RBP30.82■■■□□ 2.52
SMARCC1-203ENST00000454240 RAB27AP51159 221 aa30.82■■■□□ 2.52
SMARCC1-203ENST00000454240 NDUFA8P51970 172 aa30.82■■■□□ 2.52
SMARCC1-203ENST00000454240 AMPD3Q01432 767 aa30.82■■■□□ 2.52
SMARCC1-203ENST00000454240 PRPF4BQ13523 1007 aaKnown RBP30.82■■■□□ 2.52
SMARCC1-203ENST00000454240 MRPS27Q92552 414 aaKnown RBP30.82■■■□□ 2.52
SMARCC1-203ENST00000454240 FIZ1Q96SL8 496 aa30.82■■■□□ 2.52
SMARCC1-203ENST00000454240 TTYH1Q9H313 450 aaPredicted RBP30.82■■■□□ 2.52
SMARCC1-203ENST00000454240 ZHX3Q9H4I2 956 aa30.82■■■□□ 2.52
SMARCC1-203ENST00000454240 CHD9Q3L8U1 2897 aa30.82■■■□□ 2.52
SMARCC1-203ENST00000454240 TRAK2O60296 914 aa30.81■■■□□ 2.52
SMARCC1-203ENST00000454240 MAPTP10636 758 aaKnown RBP30.81■■■□□ 2.52
SMARCC1-203ENST00000454240 LIG1P18858 919 aa30.81■■■□□ 2.52
SMARCC1-203ENST00000454240 CNNM4Q6P4Q7 775 aa30.81■■■□□ 2.52
SMARCC1-203ENST00000454240 FSIP1Q8NA03 581 aa30.81■■■□□ 2.52
SMARCC1-203ENST00000454240 TRIM9Q9C026 710 aa30.81■■■□□ 2.52
SMARCC1-203ENST00000454240 ZNF576Q9H609 170 aa30.81■■■□□ 2.52
SMARCC1-203ENST00000454240 USP25Q9UHP3 1055 aa30.81■■■□□ 2.52
SMARCC1-203ENST00000454240 SERTAD1Q9UHV2 236 aa30.81■■■□□ 2.52
SMARCC1-203ENST00000454240 PCDHB2Q9Y5E7 798 aa30.81■■■□□ 2.52
SMARCC1-203ENST00000454240 FRMD3A2A2Y4 597 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 H0YCG3 227 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 ACTN4O43707 911 aaKnown RBP30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 SLFN14P0C7P3 912 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 SYKP43405 635 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 TAP1Q03518 808 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 ZNF697Q5TEC3 545 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 NT5DC1Q5TFE4 455 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 PPP2R2DQ66LE6 453 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 HAUS6Q7Z4H7 955 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 MRPL10Q7Z7H8 261 aaKnown RBP30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 C7orf25Q9BPX7 421 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 EIF2AQ9BY44 585 aaKnown RBP30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 SEMA6BQ9H3T3 888 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 GOLPH3LQ9H4A5 285 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 RNF19AQ9NV58 838 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 USP20Q9Y2K6 914 aa30.8■■■□□ 2.52
SMARCC1-203ENST00000454240 NLRC5Q86WI3 1866 aa30.79■■■□□ 2.52
SMARCC1-203ENST00000454240 LINC01553A4QN01 128 aa30.79■■■□□ 2.52
SMARCC1-203ENST00000454240 FGFR1P11362 822 aa30.79■■■□□ 2.52
SMARCC1-203ENST00000454240 SCP2P22307 547 aa30.79■■■□□ 2.52
SMARCC1-203ENST00000454240 GATMP50440 423 aa30.79■■■□□ 2.52
SMARCC1-203ENST00000454240 LONRF3Q496Y0 759 aa30.79■■■□□ 2.52
SMARCC1-203ENST00000454240 TPRNQ4KMQ1 711 aa30.79■■■□□ 2.52
SMARCC1-203ENST00000454240 SLC27A1Q6PCB7 646 aa30.79■■■□□ 2.52
SMARCC1-203ENST00000454240 CDR2LQ86X02 465 aaPredicted RBP30.79■■■□□ 2.52
SMARCC1-203ENST00000454240 CEP57L1Q8IYX8 460 aa30.79■■■□□ 2.52
SMARCC1-203ENST00000454240 SEL1LQ9UBV2 794 aa30.79■■■□□ 2.52
SMARCC1-203ENST00000454240 N4BP3O15049 544 aa30.78■■■□□ 2.52
SMARCC1-203ENST00000454240 GAP43P17677 238 aa30.78■■■□□ 2.52
SMARCC1-203ENST00000454240 FAM178BQ8IXR5 827 aa30.78■■■□□ 2.52
SMARCC1-203ENST00000454240 CMTR2Q8IYT2 770 aaKnown RBP30.78■■■□□ 2.52
SMARCC1-203ENST00000454240 CNNM3Q8NE01 707 aa30.78■■■□□ 2.52
SMARCC1-203ENST00000454240 PDZD7Q9H5P4 517 aa30.78■■■□□ 2.52
SMARCC1-203ENST00000454240 GOLGA6L4A6NEF3 574 aa30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 HOXA2O43364 376 aa30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 IDEP14735 1019 aa30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 CSPP1Q1MSJ5 1256 aa30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 RALGAPA2Q2PPJ7 1873 aa30.77■■■□□ 2.52
SMARCC1-203ENST00000454240 Q7L0L9 218 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms