RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 DGAT1O75907 488 aa20.38■□□□□ 0.85
SEC22C-212ENST00000454141 GALTP07902 379 aa20.38■□□□□ 0.85
SEC22C-212ENST00000454141 HOXB8P17481 243 aaPredicted RBP20.38■□□□□ 0.85
SEC22C-212ENST00000454141 GUCY1B3Q02153 619 aa20.38■□□□□ 0.85
SEC22C-212ENST00000454141 CBX2Q14781 532 aaPredicted RBP20.38■□□□□ 0.85
SEC22C-212ENST00000454141 PCBP1Q15365 356 aaKnown RBP eCLIP20.38■□□□□ 0.85
SEC22C-212ENST00000454141 SAFBQ15424 915 aaKnown RBP eCLIP20.38■□□□□ 0.85
SEC22C-212ENST00000454141 SYCE2Q6PIF2 218 aa20.38■□□□□ 0.85
SEC22C-212ENST00000454141 IGSF21Q96ID5 467 aa20.38■□□□□ 0.85
SEC22C-212ENST00000454141 DNAJB4Q9UDY4 337 aa20.38■□□□□ 0.85
SEC22C-212ENST00000454141 LIMCH1Q9UPQ0 1083 aa20.38■□□□□ 0.85
SEC22C-212ENST00000454141 HCFC2Q9Y5Z7 792 aa20.38■□□□□ 0.85
SEC22C-212ENST00000454141 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.37■□□□□ 0.85
SEC22C-212ENST00000454141 POTEMA6NI47 508 aa20.37■□□□□ 0.85
SEC22C-212ENST00000454141 CXCL14O95715 111 aa20.37■□□□□ 0.85
SEC22C-212ENST00000454141 SLC11A1P49279 550 aa20.37■□□□□ 0.85
SEC22C-212ENST00000454141 RARRES1P49788 294 aa20.37■□□□□ 0.85
SEC22C-212ENST00000454141 PTENP60484 403 aa20.37■□□□□ 0.85
SEC22C-212ENST00000454141 TFDP1Q14186 410 aa20.37■□□□□ 0.85
SEC22C-212ENST00000454141 DDX53Q86TM3 631 aaKnown RBP20.37■□□□□ 0.85
SEC22C-212ENST00000454141 CCDC83Q8IWF9 413 aa20.37■□□□□ 0.85
SEC22C-212ENST00000454141 BCL7CQ8WUZ0 217 aaPredicted RBP20.37■□□□□ 0.85
SEC22C-212ENST00000454141 RPGRIP1Q96KN7 1286 aa20.37■□□□□ 0.85
SEC22C-212ENST00000454141 APOL5Q9BWW9 433 aa20.37■□□□□ 0.85
SEC22C-212ENST00000454141 TMEM60Q9H2L4 133 aa20.37■□□□□ 0.85
SEC22C-212ENST00000454141 TRIOO75962 3097 aa20.37■□□□□ 0.85
SEC22C-212ENST00000454141 INO80B-WBP1J3KQ70 363 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 B4GALT3O60512 393 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 TSPAN1O60635 241 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 CLASP2O75122 1294 aaKnown RBP20.36■□□□□ 0.85
SEC22C-212ENST00000454141 NCLP19338 710 aaKnown RBP20.36■□□□□ 0.85
SEC22C-212ENST00000454141 ATP2B1P20020 1258 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 AXLP30530 894 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 MCM7P33993 719 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 POU5F1BQ06416 359 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 CAPSQ13938 189 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 TPRNQ4KMQ1 711 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 NOTUMQ6P988 496 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 ZNF280BQ86YH2 543 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 IFNLR1Q8IU57 520 aaPredicted RBP20.36■□□□□ 0.85
SEC22C-212ENST00000454141 CNNM3Q8NE01 707 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 ASAP3Q8TDY4 903 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 PIGOQ8TEQ8 1089 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 C8orf76Q96K31 380 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 KANSL3Q9P2N6 904 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 IRAK3Q9Y616 596 aa20.36■□□□□ 0.85
SEC22C-212ENST00000454141 CTSAP10619 480 aa20.35■□□□□ 0.85
SEC22C-212ENST00000454141 ARL2P36404 184 aa20.35■□□□□ 0.85
SEC22C-212ENST00000454141 AFF1P51825 1210 aaKnown RBP20.35■□□□□ 0.85
SEC22C-212ENST00000454141 GIT2Q14161 759 aa20.35■□□□□ 0.85
SEC22C-212ENST00000454141 TMEM87AQ8NBN3 555 aa20.35■□□□□ 0.85
SEC22C-212ENST00000454141 SMG8Q8ND04 991 aaKnown RBP20.35■□□□□ 0.85
SEC22C-212ENST00000454141 AUTS2Q8WXX7 1259 aa20.35■□□□□ 0.85
SEC22C-212ENST00000454141 EDAQ92838 391 aa20.35■□□□□ 0.85
SEC22C-212ENST00000454141 CCDC51Q96ER9 411 aa20.35■□□□□ 0.85
SEC22C-212ENST00000454141 LLPHQ9BRT6 129 aaKnown RBP20.35■□□□□ 0.85
SEC22C-212ENST00000454141 UBN1Q9NPG3 1134 aa20.35■□□□□ 0.85
SEC22C-212ENST00000454141 USO1O60763 962 aaKnown RBP20.34■□□□□ 0.85
SEC22C-212ENST00000454141 DDHD2O94830 711 aa20.34■□□□□ 0.85
SEC22C-212ENST00000454141 ITGA4P13612 1032 aa20.34■□□□□ 0.85
SEC22C-212ENST00000454141 GLRA2P23416 452 aa20.34■□□□□ 0.85
SEC22C-212ENST00000454141 MBTD1Q05BQ5 628 aa20.34■□□□□ 0.85
SEC22C-212ENST00000454141 NCBP1Q09161 790 aaKnown RBP20.34■□□□□ 0.85
SEC22C-212ENST00000454141 HFE2Q6ZVN8 426 aa20.34■□□□□ 0.85
SEC22C-212ENST00000454141 CPB2Q96IY4 423 aa20.34■□□□□ 0.85
SEC22C-212ENST00000454141 FAM193BQ96PV7 902 aaPredicted RBP20.34■□□□□ 0.85
SEC22C-212ENST00000454141 EIF2AQ9BY44 585 aaKnown RBP20.34■□□□□ 0.85
SEC22C-212ENST00000454141 NFKBIZQ9BYH8 718 aa20.34■□□□□ 0.85
SEC22C-212ENST00000454141 STK39Q9UEW8 545 aa20.34■□□□□ 0.85
SEC22C-212ENST00000454141 IPPQ9Y573 584 aa20.34■□□□□ 0.85
SEC22C-212ENST00000454141 A0A087WWV3 80 aa20.33■□□□□ 0.85
SEC22C-212ENST00000454141 POMCP01189 267 aa20.33■□□□□ 0.85
SEC22C-212ENST00000454141 SPATA31C1P0DKV0 1188 aa20.33■□□□□ 0.85
SEC22C-212ENST00000454141 XRCC6P12956 609 aaKnown RBP eCLIP20.33■□□□□ 0.85
SEC22C-212ENST00000454141 ITIH3Q06033 890 aa20.33■□□□□ 0.85
SEC22C-212ENST00000454141 ORC2Q13416 577 aaPredicted RBP20.33■□□□□ 0.85
SEC22C-212ENST00000454141 AMHR2Q16671 573 aa20.33■□□□□ 0.85
SEC22C-212ENST00000454141 CES5AQ6NT32 575 aa20.33■□□□□ 0.85
SEC22C-212ENST00000454141 TMEM175Q9BSA9 504 aa20.33■□□□□ 0.85
SEC22C-212ENST00000454141 VN1R3Q9BXE9 311 aa20.33■□□□□ 0.85
SEC22C-212ENST00000454141 CSRNP2Q9H175 543 aa20.33■□□□□ 0.85
SEC22C-212ENST00000454141 POLR3FQ9H1D9 316 aaPredicted RBP20.33■□□□□ 0.85
SEC22C-212ENST00000454141 ADAM7Q9H2U9 754 aa20.33■□□□□ 0.85
SEC22C-212ENST00000454141 FOXP1Q9H334 677 aaPredicted RBP20.33■□□□□ 0.85
SEC22C-212ENST00000454141 TUFT1Q9NNX1 390 aa20.33■□□□□ 0.85
SEC22C-212ENST00000454141 OR52Z1P0C646 297 aa20.32■□□□□ 0.84
SEC22C-212ENST00000454141 HMGN5P82970 282 aaKnown RBP20.32■□□□□ 0.84
SEC22C-212ENST00000454141 PTPN14Q15678 1187 aa20.32■□□□□ 0.84
SEC22C-212ENST00000454141 CATSPER3Q86XQ3 398 aa20.32■□□□□ 0.84
SEC22C-212ENST00000454141 ZSCAN31Q96LW9 406 aaPredicted RBP20.32■□□□□ 0.84
SEC22C-212ENST00000454141 DZANK1Q9NVP4 752 aa20.32■□□□□ 0.84
SEC22C-212ENST00000454141 CDH22Q9UJ99 828 aa20.32■□□□□ 0.84
SEC22C-212ENST00000454141 FAN1Q9Y2M0 1017 aa20.32■□□□□ 0.84
SEC22C-212ENST00000454141 ARL5CA6NH57 179 aa20.31■□□□□ 0.84
SEC22C-212ENST00000454141 NRP1O14786 923 aa20.31■□□□□ 0.84
SEC22C-212ENST00000454141 INPPL1O15357 1258 aa20.31■□□□□ 0.84
SEC22C-212ENST00000454141 MED24O75448 989 aa20.31■□□□□ 0.84
SEC22C-212ENST00000454141 ALDH2P05091 517 aa20.31■□□□□ 0.84
SEC22C-212ENST00000454141 ARF4P18085 180 aaPredicted RBP20.31■□□□□ 0.84
SEC22C-212ENST00000454141 MLH1P40692 756 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms