RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 DCLK2Q8N568 766 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 SLC10A4Q96EP9 437 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 IL17RAQ96F46 866 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 ZIM3Q96PE6 472 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 AGPAT5Q9NUQ2 364 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 GLI2P10070 1586 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 USP17L5A8MUK1 530 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 TCP11X1B4DZS4 312 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 CHN1P15882 459 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 XPAP23025 273 aaPredicted RBP12.82□□□□□ -0.36
SEC16A-207ENST00000453963 CCND1P24385 295 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 EEF1DP29692 281 aaKnown RBP12.82□□□□□ -0.36
SEC16A-207ENST00000453963 TEDDM1Q5T9Z0 273 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 PDXDC2PQ6P474 469 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 RHOT1Q8IXI2 618 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 ATP6V1E2Q96A05 226 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 FGD4Q96M96 766 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 C7orf25Q9BPX7 421 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 RBM12Q9NTZ6 932 aaKnown RBP12.82□□□□□ -0.36
SEC16A-207ENST00000453963 KPNA7A9QM74 516 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 KRT14P02533 472 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 HOXA13P31271 388 aaPredicted RBP12.82□□□□□ -0.36
SEC16A-207ENST00000453963 IGDCC4Q8TDY8 1250 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 CCDC124Q96CT7 223 aaKnown RBP12.82□□□□□ -0.36
SEC16A-207ENST00000453963 CYFIP2Q96F07 1278 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 ZWILCHQ9H900 591 aa12.82□□□□□ -0.36
SEC16A-207ENST00000453963 SMG5Q9UPR3 1016 aaKnown RBP12.82□□□□□ -0.36
SEC16A-207ENST00000453963 CRB1P82279 1406 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 PDXKO00764 312 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 CDH16O75309 829 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 PSAPP07602 524 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 FDPSP14324 419 aaKnown RBP12.81□□□□□ -0.36
SEC16A-207ENST00000453963 PRELPP51888 382 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 FOXO4P98177 505 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 C7orf31Q8N865 590 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 MS4A14Q96JA4 679 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 TTC1Q99614 292 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 CPSF3Q9UKF6 684 aaKnown RBP12.81□□□□□ -0.36
SEC16A-207ENST00000453963 STRIP2Q9ULQ0 834 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 PLEKHG2Q9H7P9 1386 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 CFAP69A5D8W1 941 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 K7ERI5 159 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 VAMP7P51809 220 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 NCAPHQ15003 741 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 TAF1BQ53T94 588 aaPredicted RBP12.81□□□□□ -0.36
SEC16A-207ENST00000453963 IZUMO3Q5VZ72 239 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 ZC3H15Q8WU90 426 aaKnown RBP12.81□□□□□ -0.36
SEC16A-207ENST00000453963 PRMT1Q99873 361 aaKnown RBP12.81□□□□□ -0.36
SEC16A-207ENST00000453963 TRIM10Q9UDY6 481 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 PXDNLA1KZ92 1463 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 STXBP3O00186 592 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 DIAPH2O60879 1101 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 MTERF2Q49AM1 385 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 ENOSF1Q7L5Y1 443 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 SGSM3Q96HU1 749 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 CYP26B1Q9NR63 512 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 SUFUQ9UMX1 484 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 TRIM33Q9UPN9 1127 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 PITPNM2Q9BZ72 1349 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 NMT2O60551 498 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 HNRNPH1P31943 449 aaKnown RBP12.81□□□□□ -0.36
SEC16A-207ENST00000453963 NFIXQ14938 502 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 ATG9AQ7Z3C6 839 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 C3orf20Q8ND61 904 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 RNF25Q96BH1 459 aaPredicted RBP12.81□□□□□ -0.36
SEC16A-207ENST00000453963 C11orf70Q9BRQ4 267 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 MSTO1Q9BUK6 570 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 SMYD3Q9H7B4 428 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 TTC7AQ9ULT0 858 aaPredicted RBP12.81□□□□□ -0.36
SEC16A-207ENST00000453963 L1RE1Q9UN81 338 aa12.81□□□□□ -0.36
SEC16A-207ENST00000453963 MROH7-TTC4A0A0A0MT08 1334 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 PHF20L1A8MW92 1017 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 PDIA2Q13087 525 aaKnown RBP12.8□□□□□ -0.36
SEC16A-207ENST00000453963 PTGISQ16647 500 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 PADI6Q6TGC4 694 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 ACAD11Q709F0 780 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 TRPM8Q7Z2W7 1104 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 ATL2Q8NHH9 583 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.8□□□□□ -0.36
SEC16A-207ENST00000453963 EIF2AQ9BY44 585 aaKnown RBP12.8□□□□□ -0.36
SEC16A-207ENST00000453963 ISCUQ9H1K1 167 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 ECE2O60344 883 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 JAK3P52333 1124 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 GPS1Q13098 491 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 TMTC4Q5T4D3 741 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 TRIM72Q6ZMU5 477 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 RGS9BPQ6ZS82 235 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 ARMCX2Q7L311 632 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 MYLK4Q86YV6 388 aaPredicted RBP12.8□□□□□ -0.36
SEC16A-207ENST00000453963 SLC44A5Q8NCS7 719 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 GIMAP8Q8ND71 665 aaPredicted RBP12.8□□□□□ -0.36
SEC16A-207ENST00000453963 MCPH1Q8NEM0 835 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 UTYO14607 1347 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 CTDNEP1O95476 244 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 FGFR4P22455 802 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 CASP2P42575 452 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 EPHB1P54762 984 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 IL1RL1Q01638 556 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 KRT17Q04695 432 aa12.8□□□□□ -0.36
SEC16A-207ENST00000453963 KLC1Q07866 573 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms