RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 TSPYL2Q9H2G4 693 aaPredicted RBP16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 BLZF1Q9H2G9 400 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 ARHGAP28Q9P2N2 729 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 HOOK1Q9UJC3 728 aaKnown RBP16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 LRFN2Q9ULH4 789 aa16.09■□□□□ 0.17
NCKIPSD-207ENST00000453349 RBAK-RBAKDNI3L0D1 243 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 K7ENM7 598 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 ACKR2O00590 384 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 GTPBP6O43824 516 aaPredicted RBP16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 MGEA5O60502 916 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 TSPAN1O60635 241 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 SNW1Q13573 536 aaKnown RBP16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 CUL4BQ13620 913 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 NOTUMQ6P988 496 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 SFR1Q86XK3 245 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 GRAMD1CQ8IYS0 662 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 TMEM161BQ8NDZ6 487 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 TOP1MTQ969P6 601 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 CCDC47Q96A33 483 aaKnown RBP16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 CPB2Q96IY4 423 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 TIGD1Q96MW7 591 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 ZBED2Q9BTP6 218 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 CCDC113Q9H0I3 377 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 MRPL44Q9H9J2 332 aaKnown RBP16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 PCDHB7Q9Y5E2 793 aa16.08■□□□□ 0.16
NCKIPSD-207ENST00000453349 FRMD3A2A2Y4 597 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 NR1I2O75469 434 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 UPP2O95045 317 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 ARF4P18085 180 aaPredicted RBP16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 CASP1P29466 404 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 NMT1P30419 496 aaKnown RBP16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 HOXA11P31270 313 aaPredicted RBP16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 SARSP49591 514 aaKnown RBP16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 DEFB103AP81534 67 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 COASYQ13057 564 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 AMHR2Q16671 573 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 UNC13DQ70J99 1090 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 ZNF720Q7Z2F6 126 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 LINC01599Q8WXQ3 324 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 CCDC51Q96ER9 411 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 OLFML3Q9NRN5 406 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 TBC1D7Q9P0N9 293 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 PCDHB13Q9Y5F0 798 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 ADGRA3Q8IWK6 1321 aa16.07■□□□□ 0.16
NCKIPSD-207ENST00000453349 A0A0U1RQF3 1178 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 A0A1B0GUA9 196 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 C9IYK1 514 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 N4BP3O15049 544 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 B4GALT5O43286 388 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 KINO60870 393 aaKnown RBP16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 EOMESO95936 686 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 IBSPP21815 317 aaPredicted RBP16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 RAB27AP51159 221 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 FAM189BP81408 668 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 LRIT3Q3SXY7 679 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 STXBP4Q6ZWJ1 553 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 APBB1IPQ7Z5R6 666 aaPredicted RBP16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 NPAS4Q8IUM7 802 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 ADPGKQ9BRR6 497 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 TRAIPQ9BWF2 469 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 MRPL4Q9BYD3 311 aaKnown RBP16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 ST6GALNAC4Q9H4F1 302 aa16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 ELAC1Q9H777 363 aaKnown RBP16.06■□□□□ 0.16
NCKIPSD-207ENST00000453349 CNTNAP2Q9UHC6 1331 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 GCNT3O95395 438 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 GTF2BQ00403 316 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 PSMD2Q13200 908 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 ALCAMQ13740 583 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 POSTNQ15063 836 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 NT5DC1Q5TFE4 455 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 ATF7IP2Q5U623 682 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 FAM117BQ6P1L5 589 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 SLC27A1Q6PCB7 646 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 ECHDC2Q86YB7 292 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 HERC6Q8IVU3 1022 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 ELOA2Q8IYF1 753 aaPredicted RBP16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 KCNN1Q92952 543 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 PGBD4Q96DM1 585 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 BICD1Q96G01 975 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 FIZ1Q96SL8 496 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 TRIM6Q9C030 488 aaPredicted RBP16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 LMBRD1Q9NUN5 540 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 FAM105AQ9NUU6 356 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 EXOC1Q9NV70 894 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 TMEM161AQ9NX61 479 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 TBX20Q9UMR3 447 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 MYH11P35749 1972 aa16.05■□□□□ 0.16
NCKIPSD-207ENST00000453349 GRXCR1A8MXD5 290 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 TLL1O43897 1013 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 ZNF623O75123 536 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 RPN1P04843 607 aaKnown RBP16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 SMAD3P84022 425 aaKnown RBP16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 ZC2HC1CQ53FD0 456 aaPredicted RBP16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 TAS1R3Q7RTX0 852 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 TMCO2Q7Z6W1 182 aaPredicted RBP16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 HACE1Q8IYU2 909 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 HVCN1Q96D96 273 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 RAD9AQ99638 391 aa16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 ACO2Q99798 780 aaKnown RBP16.04■□□□□ 0.16
NCKIPSD-207ENST00000453349 TCHPQ9BT92 498 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms