RNA–Protein interactions for RNA: ENST00000453171.5

KRTCAP3-204, Transcript of keratinocyte associated protein 3, humanhuman

TSL 3

Gene KRTCAP3, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3-204ENST00000453171 FAM13AO94988 1023 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 ARHGEF15O94989 841 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 PRKCBP05771 671 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 ATF7P17544 494 aaPredicted RBP13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 NDUFA8P51970 172 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 NCKAP1LP55160 1127 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 UBXN11Q5T124 520 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 TWF2Q6IBS0 349 aaKnown RBP13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 GPR153Q6NV75 609 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 NOTUMQ6P988 496 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 DYMQ7RTS9 669 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 TAS1R3Q7RTX0 852 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 ZNF598Q86UK7 904 aaKnown RBP13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 ECHDC2Q86YB7 292 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 FSIP1Q8NA03 581 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 TMEM161BQ8NDZ6 487 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 SP7Q8TDD2 431 aaPredicted RBP13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 MRPS27Q92552 414 aaKnown RBP13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 STAMQ92783 540 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 TIFAQ96CG3 184 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 CCDC51Q96ER9 411 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 CPB2Q96IY4 423 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 FIZ1Q96SL8 496 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 RAD9AQ99638 391 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 ZBED2Q9BTP6 218 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 GOLPH3LQ9H4A5 285 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 TMEM134Q9H6X4 195 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 ELAC1Q9H777 363 aaKnown RBP13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 TMEM161AQ9NX61 479 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 KCNG1Q9UIX4 513 aa13.13□□□□□ -0.31
KRTCAP3-204ENST00000453171 CITO14578 2027 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 TMEM265A0A087WTH1 108 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 A0A1B0GUA9 196 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 DGKIO75912 1065 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 CA3P07451 260 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 SLFN14P0C7P3 912 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 STAG3L1P0CL83 205 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 RAB27AP51159 221 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 SMTNP53814 917 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 CNNM4Q6P4Q7 775 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 MYCT1Q8N699 235 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 TMEM87AQ8NBN3 555 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 ZNF689Q96CS4 500 aaPredicted RBP13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 TRIM9Q9C026 710 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 NKX2-4Q9H2Z4 354 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 ZHX3Q9H4I2 956 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 FAM105AQ9NUU6 356 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 RNF19AQ9NV58 838 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 SEL1LQ9UBV2 794 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 USP25Q9UHP3 1055 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 SERTAD1Q9UHV2 236 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 MSRAQ9UJ68 235 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 INSL6Q9Y581 213 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 PCDHB7Q9Y5E2 793 aa13.12□□□□□ -0.31
KRTCAP3-204ENST00000453171 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 K7ERI5 159 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 TRAK2O60296 914 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 ZNF623O75123 536 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 MAPTP10636 758 aaKnown RBP13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 GAP43P17677 238 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 IBSPP21815 317 aaPredicted RBP13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 SYKP43405 635 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 GATMP50440 423 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 NCBP1Q09161 790 aaKnown RBP13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 PRPF4BQ13523 1007 aaKnown RBP13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 LONRF3Q496Y0 759 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 NT5DC1Q5TFE4 455 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 HAUS6Q7Z4H7 955 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 SFR1Q86XK3 245 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 YME1L1Q96TA2 773 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 C7orf25Q9BPX7 421 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 EIF2AQ9BY44 585 aaKnown RBP13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 LRRC27Q9C0I9 530 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 TTYH1Q9H313 450 aaPredicted RBP13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 LRFN2Q9ULH4 789 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 USP20Q9Y2K6 914 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 PCDHB2Q9Y5E7 798 aa13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 COL4A4P53420 1690 aaPredicted RBP13.11□□□□□ -0.31
KRTCAP3-204ENST00000453171 LINC01553A4QN01 128 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 H0YCG3 227 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 K7ENM7 598 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 EOMESO95936 686 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 FGFR1P11362 822 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 SKIP12755 728 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 LIG1P18858 919 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 SCP2P22307 547 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 AMPD3Q01432 767 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 TAP1Q03518 808 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 CSPP1Q1MSJ5 1256 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 TPRNQ4KMQ1 711 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 CLLU1OSQ5K130 101 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 EEF1DP3Q658K8 133 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 SLC27A1Q6PCB7 646 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 MRPL10Q7Z7H8 261 aaKnown RBP13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 CDR2LQ86X02 465 aaPredicted RBP13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 FAM178BQ8IXR5 827 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 CMTR2Q8IYT2 770 aaKnown RBP13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 CEP57L1Q8IYX8 460 aa13.1□□□□□ -0.31
KRTCAP3-204ENST00000453171 SMG8Q8ND04 991 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms