RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 NETO1Q8TDF5 533 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 JADE3Q92613 823 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 DPF3Q92784 378 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 ERCC4Q92889 916 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 ATP2A3Q93084 1043 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 JAKMIP2Q96AA8 810 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 MVB12AQ96EY5 273 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 MISP3Q96FF7 219 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 FBXL18Q96ME1 805 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 MIPEPQ99797 713 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 NCAPGQ9BPX3 1015 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 FOXQ1Q9C009 403 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 KIAA1683Q9H0B3 1180 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 MAGEH1Q9H213 219 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 PRDM5Q9NQX1 630 aaPredicted RBP4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 HAUS2Q9NVX0 235 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 ZSWIM5Q9P217 1185 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 HERC5Q9UII4 1024 aaKnown RBP4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 CEP83Q9Y592 693 aa4.99□□□□□ -1.61
HMGB3P21-201ENST00000452483 ERICH4A6NGS2 130 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 INO80B-WBP1J3KQ70 363 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 USO1O60763 962 aaKnown RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 SLC4A1P02730 911 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 KRT1P04264 644 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 ALOX12P18054 663 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 PDIA3P30101 505 aaKnown RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 ABCD1P33897 745 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 ACTN2P35609 894 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 ADKP55263 362 aaKnown RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 RNASE9P60153 205 aaKnown RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 UBXN2AP68543 259 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 UBXN1Q04323 297 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 CALD1Q05682 793 aaKnown RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 PDE4BQ07343 736 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 MOGSQ13724 837 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 SCARB2Q14108 478 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 SMAD1Q15797 465 aaKnown RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 PRAMEF13Q5VWM6 474 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 GALNT17Q6IS24 598 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 MTDHQ86UE4 582 aaKnown RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 NLRP14Q86W24 1093 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 TP53INP2Q8IXH6 220 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 ABI1Q8IZP0 508 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 CCAR2Q8N163 923 aaKnown RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 TRIML1Q8N9V2 468 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 BVESQ8NE79 360 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 BCL7CQ8WUZ0 217 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 RUFY2Q8WXA3 655 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 PHKBQ93100 1093 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 RRP36Q96EU6 259 aaKnown RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 HEXIM2Q96MH2 286 aaKnown RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 SORBS1Q9BX66 1292 aaKnown RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 TXLNGYQ9BZA5 131 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 GBP3Q9H0R5 595 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 SIL1Q9H173 461 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 CYP26B1Q9NR63 512 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 PLSCR4Q9NRQ2 329 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 KRT84Q9NSB2 600 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 CCM2LQ9NUG4 571 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 COMMD8Q9NX08 183 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 ORC3Q9UBD5 711 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 RABL2AQ9UBK7 228 aaPredicted RBP4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 B4GALT6Q9UBX8 382 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 VPS28Q9UK41 221 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 ITGB1BP2Q9UKP3 347 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 BLOC1S6Q9UL45 172 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 AGTPBP1Q9UPW5 1226 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 SLC5A6Q9Y289 635 aa4.98□□□□□ -1.61
HMGB3P21-201ENST00000452483 TRAF5O00463 557 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 DDX3XO00571 662 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 HOXC11O43248 304 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 DOK2O60496 412 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 DNAJA2O60884 412 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 SOAT2O75908 522 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 FSBPO95073 299 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 TGDSO95455 350 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 EOMESO95936 686 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 CAPNS1P04632 268 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 THEGLP0DJG4 465 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 ZBTB48P10074 688 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 VEGFAP15692 232 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 KCNA6P17658 529 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 HTR1BP28222 390 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 GPR3P46089 330 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 MRE11P49959 708 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 FXR1P51114 621 aaKnown RBP eCLIP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 IRAK1P51617 712 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 KIF23Q02241 960 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 POLD3Q15054 466 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 NTRK3Q16288 839 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 UAP1L1Q3KQV9 507 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 MCTP1Q6DN14 999 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 KLHL10Q6JEL2 608 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 CNSTQ6PJW8 725 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 ZNF574Q6ZN55 896 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 RAPH1Q70E73 1250 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 USP53Q70EK8 1073 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 FAM214BQ7L5A3 538 aa4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 DNAJB7Q7Z6W7 309 aaPredicted RBP4.97□□□□□ -1.61
HMGB3P21-201ENST00000452483 WFDC3Q8IUB2 231 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms