RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 TMEM87AQ8NBN3 555 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 URGCPQ8TCY9 931 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 PSPC1Q8WXF1 523 aaKnown RBP12.19□□□□□ -0.46
USP1-204ENST00000452143 LPPQ93052 612 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 PHF20Q9BVI0 1012 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 DHX33Q9H6R0 707 aaKnown RBP12.19□□□□□ -0.46
USP1-204ENST00000452143 NRDE2Q9H7Z3 1164 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 IFT122Q9HBG6 1241 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 TDRD15B5MCY1 1934 aaKnown RBP12.19□□□□□ -0.46
USP1-204ENST00000452143 SPTBN4Q9H254 2564 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 CCDC194A0A1B0GVG4 234 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 C2CD4DB7Z1M9 353 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 OFD1O75665 1012 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 P4HBP07237 508 aaKnown RBP12.18□□□□□ -0.46
USP1-204ENST00000452143 GALTP07902 379 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 AVPR2P30518 371 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 VCPP55072 806 aaKnown RBP12.18□□□□□ -0.46
USP1-204ENST00000452143 PTPN14Q15678 1187 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 KSR1Q8IVT5 923 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 ZDHHC14Q8IZN3 488 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 PLCD3Q8N3E9 789 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 KREMEN2Q8NCW0 462 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 AIFM3Q96NN9 605 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 SFXN1Q9H9B4 322 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 RSAD1Q9HA92 442 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 KANSL3Q9P2N6 904 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 CDH22Q9UJ99 828 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 INPP5FQ9Y2H2 1132 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 PCDHB2Q9Y5E7 798 aa12.18□□□□□ -0.46
USP1-204ENST00000452143 RIF1Q5UIP0 2472 aaKnown RBP12.17□□□□□ -0.46
USP1-204ENST00000452143 MEIS3P2A8K0S8 358 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 EML1O00423 815 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 SLC11A1P49279 550 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 STK3Q13188 491 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 ATAT1Q5SQI0 421 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 RARS2Q5T160 578 aaKnown RBP12.17□□□□□ -0.46
USP1-204ENST00000452143 MRPL10Q7Z7H8 261 aaKnown RBP12.17□□□□□ -0.46
USP1-204ENST00000452143 CABP7Q86V35 215 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 C4orf19Q8IY42 314 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 CNNM3Q8NE01 707 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 SLC22A17Q8WUG5 538 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 BCL7CQ8WUZ0 217 aaPredicted RBP12.17□□□□□ -0.46
USP1-204ENST00000452143 TCP11Q8WWU5 503 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 CEP170P1Q96L14 293 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 LXNQ9BS40 222 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 TMEM175Q9BSA9 504 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 EMILIN2Q9BXX0 1053 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 SLKQ9H2G2 1235 aaPredicted RBP12.17□□□□□ -0.46
USP1-204ENST00000452143 UBN1Q9NPG3 1134 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 DNAJB4Q9UDY4 337 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 DBR1Q9UK59 544 aaKnown RBP12.17□□□□□ -0.46
USP1-204ENST00000452143 WDR87Q6ZQQ6 2873 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 PLXNA3P51805 1871 aa12.17□□□□□ -0.46
USP1-204ENST00000452143 VPS13AQ96RL7 3174 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 ASAP2O43150 1006 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 CCNT1O60563 726 aaKnown RBP12.16□□□□□ -0.46
USP1-204ENST00000452143 BRD1O95696 1058 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 EPCAMP16422 314 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 YWHABP31946 246 aaKnown RBP12.16□□□□□ -0.46
USP1-204ENST00000452143 NPEPPSP55786 919 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 LAMTOR4Q0VGL1 99 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 SCRN1Q12765 414 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 EMC2Q15006 297 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 LONRF3Q496Y0 759 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 AGMOQ6ZNB7 445 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 C15orf39Q6ZRI6 1047 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 OTUD6AQ7L8S5 288 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 SLFN12Q8IYM2 578 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 PRPF31Q8WWY3 499 aaKnown RBP12.16□□□□□ -0.46
USP1-204ENST00000452143 AUTS2Q8WXX7 1259 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 CCDC51Q96ER9 411 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 PHOX2BQ99453 314 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 VN1R3Q9BXE9 311 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 GBP3Q9H0R5 595 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 PDRG1Q9NUG6 133 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 WRAP73Q9P2S5 460 aaPredicted RBP12.16□□□□□ -0.46
USP1-204ENST00000452143 KCNJ14Q9UNX9 436 aa12.16□□□□□ -0.46
USP1-204ENST00000452143 INPPL1O15357 1258 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 ST18O60284 1047 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 B4GALT3O60512 393 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 ERLIN2O94905 339 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 NCLP19338 710 aaKnown RBP12.15□□□□□ -0.46
USP1-204ENST00000452143 AXLP30530 894 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 HOXA11P31270 313 aaPredicted RBP12.15□□□□□ -0.46
USP1-204ENST00000452143 CLCN4P51793 760 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 SPIRE1Q08AE8 756 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 MXD4Q14582 209 aaPredicted RBP12.15□□□□□ -0.46
USP1-204ENST00000452143 EPHA7Q15375 998 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 UBXN11Q5T124 520 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 CCDC149Q6ZUS6 474 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 GPR149Q86SP6 731 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 FERMT3Q86UX7 667 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 ZNF280BQ86YH2 543 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 RNF149Q8NC42 400 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 HAS1Q92839 578 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 TMEM143Q96AN5 459 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 ACSF2Q96CM8 615 aaPredicted RBP12.15□□□□□ -0.46
USP1-204ENST00000452143 FAM193BQ96PV7 902 aaPredicted RBP12.15□□□□□ -0.46
USP1-204ENST00000452143 MTRQ99707 1265 aa12.15□□□□□ -0.46
USP1-204ENST00000452143 ZSWIM4Q9H7M6 989 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms