RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 IQCDQ96DY2 449 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 ERO1AQ96HE7 468 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 GBP3Q9H0R5 595 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 ACP6Q9NPH0 428 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 TMOD4Q9NZQ9 345 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.2□□□□□ -1.26
USP46-202ENST00000451218 SRGAP2O75044 1071 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 KLRC1P26715 233 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 PEX3P56589 373 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 IRX5P78411 483 aaPredicted RBP7.2□□□□□ -1.26
USP46-202ENST00000451218 KIF18AQ8NI77 898 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 NPLOC4Q8TAT6 608 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 DDX27Q96GQ7 796 aaKnown RBP7.2□□□□□ -1.26
USP46-202ENST00000451218 MYO1AQ9UBC5 1043 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 RAB21Q9UL25 225 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 DIS3Q9Y2L1 958 aaKnown RBP7.2□□□□□ -1.26
USP46-202ENST00000451218 NCANO14594 1321 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 K7ENM7 598 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 CALUO43852 315 aaPredicted RBP7.2□□□□□ -1.26
USP46-202ENST00000451218 C4BPAP04003 597 aaKnown RBP7.2□□□□□ -1.26
USP46-202ENST00000451218 GJB1P08034 283 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 TRIM21P19474 475 aaKnown RBP7.2□□□□□ -1.26
USP46-202ENST00000451218 CNGA1P29973 690 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 EMC2Q15006 297 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 METTL7BQ6UX53 244 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 FAM186BQ8IYM0 893 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 COG1Q8WTW3 980 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 ZBTB45Q96K62 511 aaPredicted RBP7.2□□□□□ -1.26
USP46-202ENST00000451218 ZSWIM1Q9BR11 485 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 RNPEPQ9H4A4 650 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 APOBEC3GQ9HC16 384 aaKnown RBP7.2□□□□□ -1.26
USP46-202ENST00000451218 NLRC4Q9NPP4 1024 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 GCNT4Q9P109 453 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 ARMCX3Q9UH62 379 aaPredicted RBP7.2□□□□□ -1.26
USP46-202ENST00000451218 CNTN6Q9UQ52 1028 aa7.2□□□□□ -1.26
USP46-202ENST00000451218 ZSCAN12O43309 604 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 C22orf31O95567 290 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 SERPING1P05155 500 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 NLRP11P59045 1033 aaKnown RBP7.19□□□□□ -1.26
USP46-202ENST00000451218 NAB2Q15742 525 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 STXBP2Q15833 593 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 GADL1Q6ZQY3 521 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 ANKRD23Q86SG2 305 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 HVCN1Q96D96 273 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 MMS19Q96T76 1030 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 C17orf75Q9HAS0 396 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 NAGPAQ9UK23 515 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 ARHGEF35A5YM69 484 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 ENC1O14682 589 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 CFHP08603 1231 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 PSMC2P35998 433 aaKnown RBP7.19□□□□□ -1.26
USP46-202ENST00000451218 TCF7P36402 384 aaPredicted RBP7.19□□□□□ -1.26
USP46-202ENST00000451218 GPC3P51654 580 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 RBM10P98175 930 aaKnown RBP7.19□□□□□ -1.26
USP46-202ENST00000451218 CYP24A1Q07973 514 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 PRPF4BQ13523 1007 aaKnown RBP7.19□□□□□ -1.26
USP46-202ENST00000451218 SPRYD7Q5W111 196 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 ZDHHC14Q8IZN3 488 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 SLC20A1Q8WUM9 679 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 INTS2Q9H0H0 1204 aaKnown RBP7.19□□□□□ -1.26
USP46-202ENST00000451218 EHD2Q9NZN4 543 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 A0A0B4J269 797 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 KIF2AO00139 706 aaPredicted RBP7.19□□□□□ -1.26
USP46-202ENST00000451218 CETN3O15182 167 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 FAM13AO94988 1023 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 SLU7O95391 586 aaKnown RBP7.19□□□□□ -1.26
USP46-202ENST00000451218 TGFB3P10600 412 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 SNRPFP62306 86 aaKnown RBP7.19□□□□□ -1.26
USP46-202ENST00000451218 CPNE8Q86YQ8 564 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 FAM71AQ8IYT1 594 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 PSPC1Q8WXF1 523 aaKnown RBP7.19□□□□□ -1.26
USP46-202ENST00000451218 CARD6Q9BX69 1037 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 PCIF1Q9H4Z3 704 aa7.19□□□□□ -1.26
USP46-202ENST00000451218 TCRBV5S1A1TA0A578 114 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 PDHXO00330 501 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 DGAT1O75907 488 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 CALCAP01258 141 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 PSAPP07602 524 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 GNG11P61952 73 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 TDRD10Q5VZ19 366 aaKnown RBP7.18□□□□□ -1.26
USP46-202ENST00000451218 PLPPR4Q7Z2D5 763 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 RASAL3Q86YV0 1011 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 TMEM143Q96AN5 459 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 TSG101Q99816 390 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 APEX2Q9UBZ4 518 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 GNEQ9Y223 722 aaKnown RBP7.18□□□□□ -1.26
USP46-202ENST00000451218 EYSQ5T1H1 3165 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 LOC102724159A0A0B4J2E5 919 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 GOLGA6L9A6NEM1 432 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 MOCS3O95396 460 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 SLC25A27O95847 323 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 MYBL2P10244 700 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 XRCC5P13010 732 aaKnown RBP7.18□□□□□ -1.26
USP46-202ENST00000451218 ECHS1P30084 290 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 CYP2J2P51589 502 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 ZNF132P52740 706 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 PWP2Q15269 919 aaKnown RBP7.18□□□□□ -1.26
USP46-202ENST00000451218 SNRNP35Q16560 246 aaKnown RBP7.18□□□□□ -1.26
USP46-202ENST00000451218 XKR3Q5GH77 459 aa7.18□□□□□ -1.26
USP46-202ENST00000451218 MEI1Q5TIA1 1274 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms