RNA–Protein interactions for RNA: ENST00000449918.1

CLTCL1-203, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-203ENST00000449918 A0A087WWV3 80 aa19.28■□□□□ 0.68
CLTCL1-203ENST00000449918 INO80B-WBP1J3KQ70 363 aa19.28■□□□□ 0.68
CLTCL1-203ENST00000449918 ZC3H11AO75152 810 aaKnown RBP eCLIP19.28■□□□□ 0.68
CLTCL1-203ENST00000449918 U2AF2P26368 475 aaKnown RBP eCLIP19.28■□□□□ 0.68
CLTCL1-203ENST00000449918 RPA1P27694 616 aa19.28■□□□□ 0.68
CLTCL1-203ENST00000449918 SMC1AQ14683 1233 aaKnown RBP19.28■□□□□ 0.68
CLTCL1-203ENST00000449918 MCPH1Q8NEM0 835 aa19.28■□□□□ 0.68
CLTCL1-203ENST00000449918 ASAP3Q8TDY4 903 aa19.28■□□□□ 0.68
CLTCL1-203ENST00000449918 TBC1D13Q9NVG8 400 aa19.28■□□□□ 0.68
CLTCL1-203ENST00000449918 C19orf67A6NJJ6 358 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 MEIS3P2A8K0S8 358 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 NT5C1B-RDH14C9J2C7 533 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 TSPAN1O60635 241 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 USO1O60763 962 aaKnown RBP19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 MED24O75448 989 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 GLP2RO95838 553 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 ALADP13716 330 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 NCLP19338 710 aaKnown RBP19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 GLRA2P23416 452 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 CAPSQ13938 189 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 UBXN11Q5T124 520 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 HAUS3Q68CZ6 603 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 NOTUMQ6P988 496 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 AGMOQ6ZNB7 445 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 MRPL43Q8N983 215 aaKnown RBP19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 SMRP1Q8NCR6 262 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 KHSRPQ92945 711 aaKnown RBP eCLIP19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 FAM193BQ96PV7 902 aaPredicted RBP19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 POLR3FQ9H1D9 316 aaPredicted RBP19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 NRDE2Q9H7Z3 1164 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 RSAD1Q9HA92 442 aa19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 BARX2Q9UMQ3 279 aaPredicted RBP19.27■□□□□ 0.68
CLTCL1-203ENST00000449918 PLXNA4Q9HCM2 1894 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 ATG2AQ2TAZ0 1938 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 HIDE1A8MVS5 230 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 GALTP07902 379 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 ITGA4P13612 1032 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 COL9A1P20849 921 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 MUTP22033 750 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 MBTD1Q05BQ5 628 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 TMEM31Q5JXX7 168 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 TMEM184AQ6ZMB5 413 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 MAEAQ7L5Y9 396 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 RAB34Q9BZG1 259 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 GBP3Q9H0R5 595 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 STK39Q9UEW8 545 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 STK24Q9Y6E0 443 aa19.26■□□□□ 0.67
CLTCL1-203ENST00000449918 ARHGEF35A5YM69 484 aa19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 CXCL14O95715 111 aa19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 ALDH2P05091 517 aa19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 MCM2P49736 904 aa19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 FXR2P51116 673 aaKnown RBP eCLIP19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 PDIA5Q14554 519 aa19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 POTEGQ6S5H5 508 aa19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 DDX53Q86TM3 631 aaKnown RBP19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 HACE1Q8IYU2 909 aa19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 TMEM87AQ8NBN3 555 aa19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 IGSF21Q96ID5 467 aa19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 TRIM6Q9C030 488 aaPredicted RBP19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 CSRNP2Q9H175 543 aa19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 LRWD1Q9UFC0 647 aa19.25■□□□□ 0.67
CLTCL1-203ENST00000449918 C2orf71A6NGG8 1288 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 LRRIQ4A6NIV6 560 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 GPR37L1O60883 481 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 CA8P35219 290 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 KCNC3Q14003 757 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 GIT2Q14161 759 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 PADI6Q6TGC4 694 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 VPS52Q8N1B4 723 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 C4orf32Q8N8J7 132 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 SMG8Q8ND04 991 aaKnown RBP19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 VN1R2Q8NFZ6 395 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 CPB2Q96IY4 423 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 TMX3Q96JJ7 454 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 TMEM175Q9BSA9 504 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 GPRC5CQ9NQ84 441 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 USP15Q9Y4E8 981 aaPredicted RBP19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 IPPQ9Y573 584 aa19.24■□□□□ 0.67
CLTCL1-203ENST00000449918 LAD1O00515 517 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 HOXB8P17481 243 aaPredicted RBP19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 ARF4P18085 180 aaPredicted RBP19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 CYP11B2P19099 503 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 CCT6AP40227 531 aaKnown RBP19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 SLC11A1P49279 550 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 TOB1P50616 345 aaPredicted RBP19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 RBM10P98175 930 aaKnown RBP19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 PTGDRQ13258 359 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 NBR1Q14596 966 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 AMHR2Q16671 573 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 ANKRD54Q6NXT1 300 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 LLGL2Q6P1M3 1020 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 ZNF280BQ86YH2 543 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 ZBTB8OSQ8IWT0 167 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 CASP10Q92851 521 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 EIF2AQ9BY44 585 aaKnown RBP19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 DNAJB4Q9UDY4 337 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 FAN1Q9Y2M0 1017 aa19.23■□□□□ 0.67
CLTCL1-203ENST00000449918 DCXO43602 365 aa19.22■□□□□ 0.67
CLTCL1-203ENST00000449918 DDHD2O94830 711 aa19.22■□□□□ 0.67
CLTCL1-203ENST00000449918 POMCP01189 267 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms