RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 ZNF576Q9H609 170 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 UBQLN1Q9UMX0 589 aaKnown RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 ZNF18P17022 549 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 IFNAR2P48551 515 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 RABGGTBP53611 331 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 ZNF200P98182 395 aaPredicted RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 NOLC1Q14978 699 aaKnown RBP eCLIP9.17□□□□□ -0.94
HCG18-238ENST00000449544 SEC23AQ15436 765 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 ZNF618Q5T7W0 954 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 KIAA1328Q86T90 577 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 CSRNP2Q9H175 543 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 RBAKQ9NYW8 714 aaPredicted RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 FNDC3AQ9Y2H6 1198 aaKnown RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 TTLL3Q9Y4R7 772 aa9.17□□□□□ -0.94
HCG18-238ENST00000449544 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.17□□□□□ -0.94
HCG18-238ENST00000449544 SPATA31C2B4DYI2 1134 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 CA3P07451 260 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 DNA2P51530 1060 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 DUOXA2Q1HG44 320 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 PDZD4Q76G19 769 aaPredicted RBP9.16□□□□□ -0.94
HCG18-238ENST00000449544 ITIH5Q86UX2 942 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 TNIP3Q96KP6 325 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 TIPINQ9BVW5 301 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 SERTAD1Q9UHV2 236 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 COL18A1P39060 1754 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 FAM155AB1AL88 458 aaPredicted RBP9.16□□□□□ -0.94
HCG18-238ENST00000449544 ATP2A1O14983 1001 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 ADCY6O43306 1168 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 ODC1P11926 461 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 CYBAP13498 195 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 NR2F2P24468 414 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 LMAN1P49257 510 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 ST8SIA6P61647 398 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 LAMTOR4Q0VGL1 99 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 ZNF699Q32M78 642 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 FMNL3Q8IVF7 1028 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 IL31RAQ8NI17 732 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 CPB2Q96IY4 423 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 NT5C1BQ96P26 610 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 MRPS17Q9Y2R5 130 aaKnown RBP9.16□□□□□ -0.94
HCG18-238ENST00000449544 IPPQ9Y573 584 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 RALAP11233 206 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 RBP5P82980 135 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 CREMQ03060 361 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 PDXDC1Q6P996 788 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 C4orf50Q6ZRC1 276 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 FAM186BQ8IYM0 893 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 TCF25Q9BQ70 676 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 NOC4LQ9BVI4 516 aaKnown RBP9.16□□□□□ -0.94
HCG18-238ENST00000449544 MAGEF1Q9HAY2 307 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 METTL14Q9HCE5 456 aaKnown RBP9.16□□□□□ -0.94
HCG18-238ENST00000449544 PCDHB4Q9Y5E5 795 aa9.16□□□□□ -0.94
HCG18-238ENST00000449544 NCK2O43639 380 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 CLTAP09496 248 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 AKAP5P24588 427 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 AXLP30530 894 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 TSHZ1Q6ZSZ6 1077 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 NIPA1Q7RTP0 329 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 PLPPR4Q7Z2D5 763 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 SFR1Q86XK3 245 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 VPS52Q8N1B4 723 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 SAMD11Q96NU1 681 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 POP1Q99575 1024 aaKnown RBP9.15□□□□□ -0.94
HCG18-238ENST00000449544 ATXN3LQ9H3M9 355 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 SNAI1O95863 264 aaPredicted RBP9.15□□□□□ -0.94
HCG18-238ENST00000449544 CYP11B2P19099 503 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 POLR2BP30876 1174 aaKnown RBP9.15□□□□□ -0.94
HCG18-238ENST00000449544 MRPS9P82933 396 aaKnown RBP9.15□□□□□ -0.94
HCG18-238ENST00000449544 SLC27A1Q6PCB7 646 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 MTHFD1LQ6UB35 978 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 TADA2BQ86TJ2 420 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 ANKS1AQ92625 1134 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 USP28Q96RU2 1077 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 TMEM117Q9H0C3 514 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 GTF2IRD1Q9UHL9 959 aa9.15□□□□□ -0.94
HCG18-238ENST00000449544 FSD2A1L4K1 749 aa9.15□□□□□ -0.95
HCG18-238ENST00000449544 ACOT2P49753 483 aa9.15□□□□□ -0.95
HCG18-238ENST00000449544 USP41Q3LFD5 358 aa9.15□□□□□ -0.95
HCG18-238ENST00000449544 SV2CQ496J9 727 aa9.15□□□□□ -0.95
HCG18-238ENST00000449544 RARS2Q5T160 578 aaKnown RBP9.15□□□□□ -0.95
HCG18-238ENST00000449544 XXYLT1Q8NBI6 393 aa9.15□□□□□ -0.95
HCG18-238ENST00000449544 TAF4BQ92750 862 aa9.15□□□□□ -0.95
HCG18-238ENST00000449544 BRD9Q9H8M2 597 aa9.15□□□□□ -0.95
HCG18-238ENST00000449544 SEL1LQ9UBV2 794 aa9.15□□□□□ -0.95
HCG18-238ENST00000449544 SF3B1O75533 1304 aaKnown RBP eCLIP9.15□□□□□ -0.95
HCG18-238ENST00000449544 MYH14Q7Z406 1995 aaKnown RBP9.15□□□□□ -0.95
HCG18-238ENST00000449544 PSMC2P35998 433 aaKnown RBP9.14□□□□□ -0.95
HCG18-238ENST00000449544 MXI1P50539 228 aa9.14□□□□□ -0.95
HCG18-238ENST00000449544 SCNN1GP51170 649 aa9.14□□□□□ -0.95
HCG18-238ENST00000449544 UBE2HP62256 183 aa9.14□□□□□ -0.95
HCG18-238ENST00000449544 RPL10AP62906 217 aaKnown RBP9.14□□□□□ -0.95
HCG18-238ENST00000449544 JAG1P78504 1218 aa9.14□□□□□ -0.95
HCG18-238ENST00000449544 PURAQ00577 322 aaKnown RBP9.14□□□□□ -0.95
HCG18-238ENST00000449544 ACCSLQ4AC99 568 aa9.14□□□□□ -0.95
HCG18-238ENST00000449544 ZNF394Q53GI3 561 aa9.14□□□□□ -0.95
HCG18-238ENST00000449544 SCYL2Q6P3W7 929 aa9.14□□□□□ -0.95
HCG18-238ENST00000449544 ADAT2Q7Z6V5 191 aaKnown RBP9.14□□□□□ -0.95
HCG18-238ENST00000449544 CCDC60Q8IWA6 550 aaPredicted RBP9.14□□□□□ -0.95
HCG18-238ENST00000449544 ZNF384Q8TF68 577 aa9.14□□□□□ -0.95
HCG18-238ENST00000449544 UCMAQ8WVF2 138 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms