RNA–Protein interactions for RNA: ENST00000449489.5

RBM39-218, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-218ENST00000449489 ZSWIM5Q9P217 1185 aa8.37□□□□□ -1.07
RBM39-218ENST00000449489 DPP7Q9UHL4 492 aa8.37□□□□□ -1.07
RBM39-218ENST00000449489 FREM2Q5SZK8 3169 aa8.37□□□□□ -1.07
RBM39-218ENST00000449489 AKAP13Q12802 2813 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 RALGAPA1Q6GYQ0 2036 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.36□□□□□ -1.07
RBM39-218ENST00000449489 N4BP1O75113 896 aaKnown RBP8.36□□□□□ -1.07
RBM39-218ENST00000449489 C1RP00736 705 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 PDIA4P13667 645 aaKnown RBP8.36□□□□□ -1.07
RBM39-218ENST00000449489 GLULP15104 373 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 ITGB5P18084 799 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 KLRC1P26715 233 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 MFAP1P55081 439 aaKnown RBP8.36□□□□□ -1.07
RBM39-218ENST00000449489 SHC2P98077 582 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 DMWDQ09019 674 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 SPECC1Q5M775 1068 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 KANK3Q6NY19 840 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 DDX53Q86TM3 631 aaKnown RBP8.36□□□□□ -1.07
RBM39-218ENST00000449489 FAM228AQ86W67 206 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 VPS52Q8N1B4 723 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 NETO1Q8TDF5 533 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 GPR152Q8TDT2 470 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 ZBTB10Q96DT7 871 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 DDX23Q9BUQ8 820 aaKnown RBP8.36□□□□□ -1.07
RBM39-218ENST00000449489 ZSCAN32Q9NX65 697 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.36□□□□□ -1.07
RBM39-218ENST00000449489 CA14Q9ULX7 337 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 LAMA4Q16363 1823 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 PATJQ8NI35 1801 aa8.36□□□□□ -1.07
RBM39-218ENST00000449489 SDK1Q7Z5N4 2213 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 COL1A2P08123 1366 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 SALL3Q9BXA9 1300 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 MTCL1Q9Y4B5 1905 aaKnown RBP8.35□□□□□ -1.07
RBM39-218ENST00000449489 A0A0U1RQF3 1178 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 ANHXE9PGG2 379 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 MEIS2O14770 477 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 LAMTOR5O43504 91 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 LZTS3O60299 673 aaPredicted RBP8.35□□□□□ -1.07
RBM39-218ENST00000449489 HBP1O60381 514 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 FOXD2O60548 495 aaPredicted RBP8.35□□□□□ -1.07
RBM39-218ENST00000449489 ATG7O95352 703 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 MX1P20591 662 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 PBX3P40426 434 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 STAT5BP51692 787 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 CLCN4P51793 760 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 BCAR1P56945 870 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 MTMR1Q13613 665 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 AGERQ15109 404 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 PTPN14Q15678 1187 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 SLC35G1Q2M3R5 365 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 PPM1JQ5JR12 505 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 IFIT1BQ5T764 474 aaKnown RBP8.35□□□□□ -1.07
RBM39-218ENST00000449489 DCLRE1AQ6PJP8 1040 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 RSPO2Q6UXX9 243 aaPredicted RBP8.35□□□□□ -1.07
RBM39-218ENST00000449489 ZNF598Q86UK7 904 aaKnown RBP8.35□□□□□ -1.07
RBM39-218ENST00000449489 ECHDC2Q86YB7 292 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 COL26A1Q96A83 441 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 FAM227BQ96M60 508 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 PIGSQ96S52 555 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 EMILIN2Q9BXX0 1053 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 BCO2Q9BYV7 579 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 KRT23Q9C075 422 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 JPH1Q9HDC5 661 aaPredicted RBP8.35□□□□□ -1.07
RBM39-218ENST00000449489 SH2B1Q9NRF2 756 aaPredicted RBP8.35□□□□□ -1.07
RBM39-218ENST00000449489 ANGPTL2Q9UKU9 493 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 SMG5Q9UPR3 1016 aaKnown RBP8.35□□□□□ -1.07
RBM39-218ENST00000449489 PCDHB9Q9Y5E1 797 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 UBIAD1Q9Y5Z9 338 aa8.35□□□□□ -1.07
RBM39-218ENST00000449489 ZFP37Q9Y6Q3 630 aaPredicted RBP8.35□□□□□ -1.07
RBM39-218ENST00000449489 NFASCO94856 1347 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 MYH9P35579 1960 aaKnown RBP8.34□□□□□ -1.07
RBM39-218ENST00000449489 IGKV6D-21A0A0A0MT36 114 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 A0A0D9SFI3 127 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 KANSL1LA0AUZ9 987 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 CYTH3O43739 400 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 ATP9BO43861 1147 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 GPR32O75388 356 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 ZSCAN20P17040 1043 aaPredicted RBP8.34□□□□□ -1.07
RBM39-218ENST00000449489 IBSPP21815 317 aaPredicted RBP8.34□□□□□ -1.07
RBM39-218ENST00000449489 PRKCQQ04759 706 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 SEC23AQ15436 765 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 ZNF484Q5JVG2 852 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 CLLU1OSQ5K130 101 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 ELMSAN1Q6PJG2 1045 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 ZNF589Q86UQ0 364 aaPredicted RBP8.34□□□□□ -1.07
RBM39-218ENST00000449489 HOMER1Q86YM7 354 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 ZNF511Q8NB15 262 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 SMARCC2Q8TAQ2 1214 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 ADAM32Q8TC27 787 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 HDAC7Q8WUI4 952 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 TRAPPC12Q8WVT3 735 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 RSAD2Q8WXG1 361 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 CUL5Q93034 780 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 IGSF21Q96ID5 467 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 UBAC1Q9BSL1 405 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 TRAIPQ9BWF2 469 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 CNNM2Q9H8M5 875 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 JADE2Q9NQC1 790 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 SLC9A2Q9UBY0 812 aa8.34□□□□□ -1.07
RBM39-218ENST00000449489 USP18Q9UMW8 372 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms