RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 SMTNP53814 917 aa17.5■□□□□ 0.39
AP000253.1-201ENST00000449339 MYL7Q01449 175 aa17.5■□□□□ 0.39
AP000253.1-201ENST00000449339 NEDD9Q14511 834 aa17.5■□□□□ 0.39
AP000253.1-201ENST00000449339 C10orf76Q5T2E6 689 aa17.5■□□□□ 0.39
AP000253.1-201ENST00000449339 TMEM143Q96AN5 459 aa17.5■□□□□ 0.39
AP000253.1-201ENST00000449339 PNMA3Q9UL41 463 aa17.5■□□□□ 0.39
AP000253.1-201ENST00000449339 GOLGA8IPA6NC78 632 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 GOLGA8JA6NMD2 632 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 PDE2AO00408 941 aaPredicted RBP17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 DLG4P78352 724 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 EMC2Q15006 297 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 CREG2Q8IUH2 290 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 XXYLT1Q8NBI6 393 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 HNRNPLLQ8WVV9 542 aaKnown RBP17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 COPS5Q92905 334 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 OSBPL9Q96SU4 736 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 HSPBP1Q9NZL4 362 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 NAGPAQ9UK23 515 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 MYH10P35580 1976 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 F8VZ95 297 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 FERP16591 822 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 TCP1P17987 556 aaKnown RBP17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 ANXA13P27216 316 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 TCF7P36402 384 aaPredicted RBP17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 STAT1P42224 750 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 GTF2A2P52657 109 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 POLGP54098 1239 aaPredicted RBP17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 SNRPFP62306 86 aaKnown RBP17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 NFRKBQ6P4R8 1299 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 MCPH1Q8NEM0 835 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 GPRC5AQ8NFJ5 357 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 COG1Q8WTW3 980 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 TLR10Q9BXR5 811 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 STK33Q9BYT3 514 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 INTS2Q9H0H0 1204 aaKnown RBP17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 PDGFCQ9NRA1 345 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 APEX2Q9UBZ4 518 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 HYOU1Q9Y4L1 999 aa17.49■□□□□ 0.39
AP000253.1-201ENST00000449339 TULP1O00294 542 aaPredicted RBP17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 GFPT2O94808 682 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 TUBBP07437 444 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 TGFB3P10600 412 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 ADSSP30520 456 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 VSNL1P62760 191 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 LONRF2Q1L5Z9 754 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 METTL7BQ6UX53 244 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 VPS36Q86VN1 386 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 DNAJC12Q9UKB3 198 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 USP20Q9Y2K6 914 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 NCK2O43639 380 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 EVI5O60447 810 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 PALMO75781 387 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 SASH3O75995 380 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 SOX5P35711 763 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 STAT5BP51692 787 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 VAMP7P51809 220 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 HSDL1Q3SXM5 330 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 ALKBH5Q6P6C2 394 aaKnown RBP17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 TRIM50Q86XT4 487 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 MAP4K3Q8IVH8 894 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 SHCBP1Q8NEM2 672 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 PLEKHO2Q8TD55 490 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 SPIRE2Q8WWL2 714 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 PSMB7Q99436 277 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 NTPCRQ9BSD7 190 aaKnown RBP17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 PCDHGC5Q9Y5F6 944 aa17.48■□□□□ 0.39
AP000253.1-201ENST00000449339 PLXNB2O15031 1838 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 ERLIN1O75477 346 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 CXCR5P32302 372 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 DRAP1Q14919 205 aaPredicted RBP17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 SLC39A4Q6P5W5 647 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 TAS1R3Q7RTX0 852 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 C2orf69Q8N8R5 385 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 ASAP3Q8TDY4 903 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 SEPT1Q8WYJ6 367 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 SAAL1Q96ER3 474 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 CEP89Q96ST8 783 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 MPHOSPH6Q99547 160 aaKnown RBP17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 TSKSQ9UJT2 592 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 PLXNA1Q9UIW2 1896 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 BTNL10A8MVZ5 291 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 ADRB2P07550 413 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 MARK3P27448 753 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 WDR93Q6P2C0 686 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 LMO3Q8TAP4 145 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 PTPN18Q99952 460 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 FUT8Q9BYC5 575 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 EXOC7Q9UPT5 735 aa17.47■□□□□ 0.39
AP000253.1-201ENST00000449339 UNCXA6NJT0 531 aa17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 MAPK13O15264 365 aa17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 CNGA1P29973 690 aa17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 PPP3CAQ08209 521 aa17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 CETN1Q12798 172 aa17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 BEND6Q5SZJ8 279 aaPredicted RBP17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 CELF3Q5SZQ8 465 aaKnown RBP17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 SPRYD7Q5W111 196 aa17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 PHLDB3Q6NSJ2 640 aa17.46■□□□□ 0.39
AP000253.1-201ENST00000449339 IFT74Q96LB3 600 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms