RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 ZNF521Q96K83 1311 aa6.09□□□□□ -1.44
CDC42BPA-209ENST00000448940 NUMA1Q14980 2115 aa6.09□□□□□ -1.44
CDC42BPA-209ENST00000448940 F8W8V4 182 aa6.09□□□□□ -1.44
CDC42BPA-209ENST00000448940 GTF2F1P35269 517 aaKnown RBP eCLIP6.09□□□□□ -1.443e-27■■■■■ 35.2
CDC42BPA-209ENST00000448940 DEKP35659 375 aaKnown RBP6.09□□□□□ -1.44
CDC42BPA-209ENST00000448940 GPS2Q13227 327 aa6.09□□□□□ -1.44
CDC42BPA-209ENST00000448940 ATP8B4Q8TF62 1192 aa6.09□□□□□ -1.44
CDC42BPA-209ENST00000448940 GJA10Q969M2 543 aa6.09□□□□□ -1.44
CDC42BPA-209ENST00000448940 DYDC2Q96IM9 177 aa6.09□□□□□ -1.44
CDC42BPA-209ENST00000448940 OSMRQ99650 979 aa6.09□□□□□ -1.44
CDC42BPA-209ENST00000448940 JUPP14923 745 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 RABGGTBP53611 331 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 RAPGEF1Q13905 1077 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 PDXDC1Q6P996 788 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 CACUL1Q86Y37 369 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 NME8Q8N427 588 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 PIGOQ8TEQ8 1089 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 LARP4BQ92615 738 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 CORO1BQ9BR76 489 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 KIAA1586Q9HCI6 787 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 CYP39A1Q9NYL5 469 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 CUTAO60888 179 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 LONP1P36776 959 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 GRSF1Q12849 480 aaKnown RBP eCLIP6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 IRF5Q13568 498 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 LRRC32Q14392 662 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAGEB10Q96LZ2 347 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 PANK4Q9NVE7 773 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 COLQQ9Y215 455 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZSCAN22P10073 491 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 PIK3CAP42336 1068 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 PSMC6P62333 389 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 SNX17Q15036 470 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 LRRC41Q15345 812 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 DCUN1D2Q6PH85 259 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 COG5Q9UP83 839 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 GLUD1P00367 558 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 LGALS2P05162 132 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAPK8P45983 427 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 MAPK9P45984 424 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 NRIP1P48552 1158 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 CLCN3P51790 818 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 DCAF4L1Q3SXM0 396 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 ZNF280DQ6N043 979 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 KIAA1328Q86T90 577 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 KAZALD1Q96I82 304 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 C12orf42Q96LP6 360 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 SLITRK1Q96PX8 696 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 PLCD4Q9BRC7 762 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 EXO5Q9H790 373 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 RBPJLQ9UBG7 517 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 MORF4L1Q9UBU8 362 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 GABRQQ9UN88 632 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 RGPD1P0DJD0 1748 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 TOPAZ1Q8N9V7 1692 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 CD4P01730 458 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 PCSK1P29120 753 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 RFC2P35250 354 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 TYRO3Q06418 890 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 TMEM164Q5U3C3 297 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 DGLUCYQ7Z3D6 616 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 TMCO5AQ8N6Q1 288 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 TTC8Q8TAM2 541 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 RIN2Q8WYP3 895 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 RABGGTAQ92696 567 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 HDAC6Q9UBN7 1215 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 ABHD14A-ACY1A0A1B0GW23 586 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 AKR1B10O60218 316 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 PCDH8O95206 1070 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 POMCP01189 267 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 BCRP11274 1271 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 YWHABP31946 246 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 EMC2Q15006 297 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 CCDC89Q8N998 374 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 REPS2Q8NFH8 660 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 PDCD6IPQ8WUM4 868 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 TMEM143Q96AN5 459 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 SCLYQ96I15 445 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 SLC9A7Q96T83 725 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 GAD1Q99259 594 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 OMDQ99983 421 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 FOXP1Q9H334 677 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 ABI2Q9NYB9 513 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 CLCA2Q9UQC9 943 aa6.08□□□□□ -1.44
CDC42BPA-209ENST00000448940 NWD2Q9ULI1 1742 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 YEATS4O95619 227 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 PYGBP11216 843 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 CAMK4Q16566 473 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 MFSD4BQ5TF39 518 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 XPO6Q96QU8 1125 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 SPG21Q9NZD8 308 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 STK39Q9UEW8 545 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 SFI1A8K8P3 1242 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 CLIC2O15247 247 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 LGR5O75473 907 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 CCL14Q16627 93 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 SH3D19Q5HYK7 790 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 RNF187Q5TA31 235 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 SRGAP1Q7Z6B7 1085 aa6.07□□□□□ -1.44
CDC42BPA-209ENST00000448940 DDX27Q96GQ7 796 aaKnown RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms