RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 LCA5LO95447 670 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 CYP2C8P10632 490 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 UCHL3P15374 230 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 PON1P27169 355 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 ANXA13P27216 316 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 TCF7P36402 384 aaPredicted RBP11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 FMO5P49326 533 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 ASIC2Q16515 512 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 BRDTQ58F21 947 aaPredicted RBP11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 SPRYD7Q5W111 196 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 PLPPR4Q7Z2D5 763 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 DHX37Q8IY37 1157 aaKnown RBP11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 ERO1AQ96HE7 468 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 FGD4Q96M96 766 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 JPH2Q9BR39 696 aaPredicted RBP11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 POLR3FQ9H1D9 316 aaPredicted RBP11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 XPNPEP1Q9NQW7 623 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 HSPBP1Q9NZL4 362 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 GCNT4Q9P109 453 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 ARHGAP20Q9P2F6 1191 aa11.52□□□□□ -0.57
VIPAS39-203ENST00000448935 EMSYQ7Z589 1322 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 SORBS3O60504 671 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 CCDC172P0C7W6 258 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 ATP4AP20648 1035 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 GARTP22102 1010 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 EIF4A3P38919 411 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 NAMPTP43490 491 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 VAMP7P51809 220 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 KIF11P52732 1056 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 VAV2P52735 878 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 MYL7Q01449 175 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 KIF5AQ12840 1032 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 STRN3Q13033 797 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 RAPGEF1Q13905 1077 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 LY6KQ17RY6 165 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 TDRD12Q587J7 1177 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 ZNF569Q5MCW4 686 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 CCDC122Q5T0U0 273 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 EEPD1Q7L9B9 569 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 ANKRD13CQ8N6S4 541 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 TCP11Q8WWU5 503 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 BRI3BPQ8WY22 251 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 JAKMIP2Q96AA8 810 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 PORCNQ9H237 461 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 EFCC1Q9HA90 598 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 KIAA1586Q9HCI6 787 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 VTA1Q9NP79 307 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 ARHGAP28Q9P2N2 729 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 DIS3Q9Y2L1 958 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 REXO2Q9Y3B8 237 aaKnown RBP11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 TRPM7Q96QT4 1865 aa11.51□□□□□ -0.57
VIPAS39-203ENST00000448935 CTAGE9A4FU28 777 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 PMM2O15305 246 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 LGR5O75473 907 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 TXNP10599 105 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 SLC9A1P19634 815 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 CNGA1P29973 690 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 ARHGAP25P42331 645 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 MCCD1P59942 119 aaPredicted RBP11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 KLHL30Q0D2K2 578 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 TARBP2Q15633 366 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 ZNF792Q3KQV3 632 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 CCDC62Q6P9F0 684 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 VPS36Q86VN1 386 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 GLG1Q92896 1179 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 GPR20Q99678 358 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 CBWD1Q9BRT8 395 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 IFIH1Q9BYX4 1025 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 SMARCAD1Q9H4L7 1026 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 PCIF1Q9H4Z3 704 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 ZCCHC17Q9NP64 241 aaKnown RBP11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 SLC5A4Q9NY91 659 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 UTRNP46939 3433 aa11.5□□□□□ -0.57
VIPAS39-203ENST00000448935 SIP14410 1827 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 RBAK-RBAKDNI3L0D1 243 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 MAFO75444 373 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 FERP16591 822 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 ADORA2AP29274 412 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 MAPK4P31152 587 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 ARL2P36404 184 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 STAT1P42224 750 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 LAMC2Q13753 1193 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 FAM110CQ1W6H9 321 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 C10orf76Q5T2E6 689 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 IER5Q5VY09 327 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 ARMCX2Q7L311 632 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 FBXO16Q8IX29 292 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 RDH13Q8NBN7 331 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 ZNF526Q8TF50 670 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 BSNDQ8WZ55 320 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 BICD1Q96G01 975 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 SPATA33Q96N06 139 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 WDR24Q96S15 920 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 PCYT2Q99447 389 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 NAPGQ99747 312 aaPredicted RBP11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 IKZF4Q9H2S9 585 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 TMEM134Q9H6X4 195 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 GUCA1BQ9UMX6 200 aa11.49□□□□□ -0.57
VIPAS39-203ENST00000448935 TELO2Q9Y4R8 837 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms