RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 NAMPTP43490 491 aa19.27■□□□□ 0.67
LMNA-208ENST00000448611 PTK2Q05397 1052 aa19.27■□□□□ 0.67
LMNA-208ENST00000448611 ARMCX2Q7L311 632 aa19.27■□□□□ 0.67
LMNA-208ENST00000448611 DHX37Q8IY37 1157 aaKnown RBP19.27■□□□□ 0.67
LMNA-208ENST00000448611 MNS1Q8NEH6 495 aa19.27■□□□□ 0.67
LMNA-208ENST00000448611 DAAM1Q9Y4D1 1078 aa19.27■□□□□ 0.67
LMNA-208ENST00000448611 PPME1Q9Y570 386 aa19.27■□□□□ 0.67
LMNA-208ENST00000448611 MCM3APO60318 1980 aa19.27■□□□□ 0.67
LMNA-208ENST00000448611 NOP56O00567 594 aaKnown RBP19.26■□□□□ 0.67
LMNA-208ENST00000448611 HNRNPDLO14979 420 aaKnown RBP19.26■□□□□ 0.67
LMNA-208ENST00000448611 PMM2O15305 246 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 MAFO75444 373 aaPredicted RBP19.26■□□□□ 0.67
LMNA-208ENST00000448611 GARTP22102 1010 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 SCP2P22307 547 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 AMPD2Q01433 879 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 TUBB2AQ13885 445 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 TMEM63BQ5T3F8 832 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 PLPPR4Q7Z2D5 763 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 ABRAQ8N0Z2 381 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 BBXQ8WY36 941 aaPredicted RBP19.26■□□□□ 0.67
LMNA-208ENST00000448611 COPS5Q92905 334 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 SECISBP2LQ93073 1101 aaKnown RBP19.26■□□□□ 0.67
LMNA-208ENST00000448611 SPATA33Q96N06 139 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 TUBB2BQ9BVA1 445 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 STK33Q9BYT3 514 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 APEX2Q9UBZ4 518 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 CDC23Q9UJX2 597 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 DNAJC12Q9UKB3 198 aa19.26■□□□□ 0.67
LMNA-208ENST00000448611 A0A087X0T9 212 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 MACROD2A1Z1Q3 448 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 TADA3O75528 432 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 FAM228BP0C875 321 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 GCLMP48507 274 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 TTLL4Q14679 1199 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 EPC2Q52LR7 807 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 ZNF571Q7Z3V5 609 aaPredicted RBP19.25■□□□□ 0.67
LMNA-208ENST00000448611 TRIM50Q86XT4 487 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 SCFD2Q8WU76 684 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 POMGNT1Q8WZA1 660 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 GLG1Q92896 1179 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 PTPN18Q99952 460 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 GPR88Q9GZN0 384 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 ADAMTS1Q9UHI8 967 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 DIS3Q9Y2L1 958 aaKnown RBP19.25■□□□□ 0.67
LMNA-208ENST00000448611 PLXNB2O15031 1838 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 F8VZ95 297 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 STRNO43815 780 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 ENOX2Q16206 610 aaKnown RBP19.25■□□□□ 0.67
LMNA-208ENST00000448611 PHLDB3Q6NSJ2 640 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 PARD3BQ8TEW8 1205 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 ATP8B4Q8TF62 1192 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 MFSD14AQ96MC6 490 aa19.25■□□□□ 0.67
LMNA-208ENST00000448611 EFCAB8A8MWE9 144 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 ZBTB42B2RXF5 422 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 MARK3P27448 753 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 STAT1P42224 750 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 CETN1Q12798 172 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 ELF2Q15723 593 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 ERCC6LQ2NKX8 1250 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 TXLNBQ8N3L3 684 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 DEPTORQ8TB45 409 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 BICD1Q96G01 975 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.24■□□□□ 0.67
LMNA-208ENST00000448611 TMEM117Q9H0C3 514 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 STYXL1Q9Y6J8 313 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 SIP14410 1827 aa19.24■□□□□ 0.67
LMNA-208ENST00000448611 LRRIQ4A6NIV6 560 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 PIGRP01833 764 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 PNMA6AP0CW24 399 aaPredicted RBP19.23■□□□□ 0.67
LMNA-208ENST00000448611 FERP16591 822 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 RFX1P22670 979 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 ANXA13P27216 316 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 SOX5P35711 763 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 STRN3Q13033 797 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 DRAP1Q14919 205 aaPredicted RBP19.23■□□□□ 0.67
LMNA-208ENST00000448611 TAPT1Q6NXT6 567 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 GPD1LQ8N335 351 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 TMC2Q8TDI7 906 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 PARK7Q99497 189 aaKnown RBP19.23■□□□□ 0.67
LMNA-208ENST00000448611 USP20Q9Y2K6 914 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 TLL2Q9Y6L7 1015 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 PLXNA1Q9UIW2 1896 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 LIG4P49917 911 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 MXI1P50539 228 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 ZNF157P51786 506 aaPredicted RBP19.23■□□□□ 0.67
LMNA-208ENST00000448611 ENPEPQ07075 957 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 CYP24A1Q07973 514 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 DRP2Q13474 957 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 CAPSQ13938 189 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 PLCB4Q15147 1175 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 PAPD7Q5XG87 772 aaKnown RBP19.23■□□□□ 0.67
LMNA-208ENST00000448611 TRAPPC11Q7Z392 1133 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 ZNF467Q7Z7K2 595 aaPredicted RBP19.23■□□□□ 0.67
LMNA-208ENST00000448611 VTA1Q9NP79 307 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 LUC7LQ9NQ29 371 aaKnown RBP19.23■□□□□ 0.67
LMNA-208ENST00000448611 SALL4Q9UJQ4 1053 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 CAPN6Q9Y6Q1 641 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 IVNS1ABPQ9Y6Y0 642 aa19.23■□□□□ 0.67
LMNA-208ENST00000448611 ANO9A1A5B4 782 aa19.22■□□□□ 0.67
LMNA-208ENST00000448611 LRRIQ3A6PVS8 624 aaPredicted RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms