RNA–Protein interactions for RNA: ENST00000447986.5

ERGIC3-209, Transcript of ERGIC and golgi 3, humanhuman

TSL 1 (best)

Gene ERGIC3, Length 1,632 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-209ENST00000447986 NOTUMQ6P988 496 aa14.42□□□□□ -0.1
ERGIC3-209ENST00000447986 NPAS4Q8IUM7 802 aa14.42□□□□□ -0.1
ERGIC3-209ENST00000447986 KBTBD4Q9NVX7 518 aa14.42□□□□□ -0.1
ERGIC3-209ENST00000447986 HPSEQ9Y251 543 aa14.42□□□□□ -0.1
ERGIC3-209ENST00000447986 PCDHB7Q9Y5E2 793 aa14.42□□□□□ -0.1
ERGIC3-209ENST00000447986 MYMKA6NI61 221 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 TRAK2O60296 914 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 MGEA5O60502 916 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 TSPAN1O60635 241 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 PRKCBP05771 671 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 SLFN14P0C7P3 912 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 IDEP14735 1019 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 LIG1P18858 919 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 ZNF131P52739 623 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 STRN3Q13033 797 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 PRPF4BQ13523 1007 aaKnown RBP14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 FAM187BQ17R55 369 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 RTN4RL1Q86UN2 441 aaPredicted RBP14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 CCDC65Q8IXS2 484 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 LINC01599Q8WXQ3 324 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 CCDC51Q96ER9 411 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 YME1L1Q96TA2 773 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 RAD9AQ99638 391 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 FZD8Q9H461 694 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 TMEM134Q9H6X4 195 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 ELAC1Q9H777 363 aaKnown RBP14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 SEL1LQ9UBV2 794 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 INSL6Q9Y581 213 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 PCDHA11Q9Y5I1 949 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 FAM237AA0A1B0GTK4 181 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 GRXCR1A8MXD5 290 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 C9IYK1 514 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 ACKR2O00590 384 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 GAP43P17677 238 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 IBSPP21815 317 aaPredicted RBP14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 NDUFA8P51970 172 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 FAM117BQ6P1L5 589 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 HOMEZQ8IX15 550 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 FAM178BQ8IXR5 827 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 KIFC3Q9BVG8 833 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 TRAIPQ9BWF2 469 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 PBX4Q9BYU1 374 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 TMEM161AQ9NX61 479 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 ARHGAP28Q9P2N2 729 aa14.41□□□□□ -0.1
ERGIC3-209ENST00000447986 ADGRA3Q8IWK6 1321 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 CNTNAP2Q9UHC6 1331 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 A0A0U1RQF3 1178 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 K7ENM7 598 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 SLC16A4O15374 487 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 HOXA2O43364 376 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 MYL1P05976 194 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 ARF4P18085 180 aaPredicted RBP14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 NCKAP1LP55160 1127 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 FAM109BQ6ICB4 259 aaPredicted RBP14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 APBB1IPQ7Z5R6 666 aaPredicted RBP14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 HACE1Q8IYU2 909 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 CNNM3Q8NE01 707 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 STAMQ92783 540 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 ADPGKQ9BRR6 497 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 TRIM9Q9C026 710 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 TRIM6Q9C030 488 aaPredicted RBP14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 CCDC113Q9H0I3 377 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 FAM105AQ9NUU6 356 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 PANK4Q9NVE7 773 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 SERTAD1Q9UHV2 236 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 MICAL3Q7RTP6 2002 aa14.4□□□□□ -0.1
ERGIC3-209ENST00000447986 N4BP3O15049 544 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 ZNF202O95125 648 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 EOMESO95936 686 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 MAPTP10636 758 aaKnown RBP14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 DNAJB2P25686 324 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 HOXA11P31270 313 aaPredicted RBP14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 AFMP43652 599 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 RABGGTBP53611 331 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 ASIC1P78348 528 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 FAM189BP81408 668 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 AMHR2Q16671 573 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 HERC4Q5GLZ8 1057 aaPredicted RBP14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 KANK3Q6NY19 840 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 SLC27A1Q6PCB7 646 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 HAUS6Q7Z4H7 955 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 TMCO2Q7Z6W1 182 aaPredicted RBP14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 ECHDC2Q86YB7 292 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 TMEM161BQ8NDZ6 487 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 DNAJC19Q96DA6 116 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 PGBD4Q96DM1 585 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 CPB2Q96IY4 423 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 C7orf25Q9BPX7 421 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 MRPL4Q9BYD3 311 aaKnown RBP14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 SLC28A3Q9HAS3 691 aa14.39□□□□□ -0.11
ERGIC3-209ENST00000447986 TCHHQ07283 1943 aa14.38□□□□□ -0.11
ERGIC3-209ENST00000447986 A0A1B0GUA9 196 aa14.38□□□□□ -0.11
ERGIC3-209ENST00000447986 B4GALT5O43286 388 aa14.38□□□□□ -0.11
ERGIC3-209ENST00000447986 ACTN4O43707 911 aaKnown RBP14.38□□□□□ -0.11
ERGIC3-209ENST00000447986 HTRA4P83105 476 aaPredicted RBP14.38□□□□□ -0.11
ERGIC3-209ENST00000447986 LONRF3Q496Y0 759 aa14.38□□□□□ -0.11
ERGIC3-209ENST00000447986 GPR153Q6NV75 609 aa14.38□□□□□ -0.11
ERGIC3-209ENST00000447986 CNNM4Q6P4Q7 775 aa14.38□□□□□ -0.11
ERGIC3-209ENST00000447986 STXBP4Q6ZWJ1 553 aa14.38□□□□□ -0.11
ERGIC3-209ENST00000447986 SFR1Q86XK3 245 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms