RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 BZW2Q9Y6E2 419 aaKnown RBP20.61■□□□□ 0.89
HMGA1-205ENST00000447654 PFDN1O60925 122 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 DCTN3O75935 186 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 LDHBP07195 334 aaKnown RBP20.61■□□□□ 0.89
HMGA1-205ENST00000447654 POLGP54098 1239 aaPredicted RBP20.61■□□□□ 0.89
HMGA1-205ENST00000447654 SLC29A2Q14542 456 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 SNX30Q5VWJ9 437 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 VSIG1Q86XK7 387 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 ECHDC2Q86YB7 292 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 ANKLE1Q8NAG6 615 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 SMYD1Q8NB12 490 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 TBC1D10AQ9BXI6 508 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 PPP1R12CQ9BZL4 782 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 RASAL2Q9UJF2 1139 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 ITGB1BP2Q9UKP3 347 aa20.61■□□□□ 0.89
HMGA1-205ENST00000447654 MYH4Q9Y623 1939 aa20.6■□□□□ 0.89
HMGA1-205ENST00000447654 PITPNM2Q9BZ72 1349 aa20.6■□□□□ 0.89
HMGA1-205ENST00000447654 IDO1P14902 403 aa20.6■□□□□ 0.89
HMGA1-205ENST00000447654 SF3A3Q12874 501 aaKnown RBP eCLIP20.6■□□□□ 0.89
HMGA1-205ENST00000447654 CCDC6Q16204 474 aa20.6■□□□□ 0.89
HMGA1-205ENST00000447654 SBK1Q52WX2 424 aa20.6■□□□□ 0.89
HMGA1-205ENST00000447654 CATIPQ7Z7H3 387 aa20.6■□□□□ 0.89
HMGA1-205ENST00000447654 RPGRQ92834 1020 aaKnown RBP20.6■□□□□ 0.89
HMGA1-205ENST00000447654 C7orf25Q9BPX7 421 aa20.6■□□□□ 0.89
HMGA1-205ENST00000447654 MTRF1LQ9UGC7 380 aaKnown RBP20.6■□□□□ 0.89
HMGA1-205ENST00000447654 DAAM1Q9Y4D1 1078 aa20.6■□□□□ 0.89
HMGA1-205ENST00000447654 ADAMTS3O15072 1205 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 MARK3P27448 753 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 NPEPPSP55786 919 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 PDE4DQ08499 809 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 MGAT5Q09328 741 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 AP1B1Q10567 949 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 NPY5RQ15761 445 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 LIN52Q52LA3 116 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 EXOC3L1Q86VI1 746 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 SRBD1Q8N5C6 995 aaKnown RBP20.59■□□□□ 0.89
HMGA1-205ENST00000447654 SUPT20HQ8NEM7 779 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 SCG3Q8WXD2 468 aaKnown RBP20.59■□□□□ 0.89
HMGA1-205ENST00000447654 MAML3Q96JK9 1138 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 RMI1Q9H9A7 625 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 STXBP5LQ9Y2K9 1186 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 BRWD3Q6RI45 1802 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 A0A0A6YYK5 440 aaPredicted RBP20.59■□□□□ 0.89
HMGA1-205ENST00000447654 BTBD19C9JJ37 291 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 MAPK13O15264 365 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 TLR2O60603 784 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 UFL1O94874 794 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 CCNJLQ8IV13 435 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 C4orf32Q8N8J7 132 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 ZBTB8BQ8NAP8 495 aaPredicted RBP20.59■□□□□ 0.89
HMGA1-205ENST00000447654 ZNF653Q96CK0 615 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 SERPINB12Q96P63 405 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 DENND2DQ9H6A0 471 aaPredicted RBP20.59■□□□□ 0.89
HMGA1-205ENST00000447654 TMEM165Q9HC07 324 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 IL17RBQ9NRM6 502 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 NDUFA13Q9P0J0 144 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 ARPP21Q9UBL0 812 aaPredicted RBP20.59■□□□□ 0.89
HMGA1-205ENST00000447654 LNPEPQ9UIQ6 1025 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 USH1CQ9Y6N9 552 aa20.59■□□□□ 0.89
HMGA1-205ENST00000447654 PCP11498 1178 aaKnown RBP20.58■□□□□ 0.89
HMGA1-205ENST00000447654 LRRC63Q05C16 580 aa20.58■□□□□ 0.89
HMGA1-205ENST00000447654 DAB2IPQ5VWQ8 1189 aa20.58■□□□□ 0.89
HMGA1-205ENST00000447654 CCDC97Q96F63 343 aaPredicted RBP20.58■□□□□ 0.89
HMGA1-205ENST00000447654 SMC6Q96SB8 1091 aa20.58■□□□□ 0.89
HMGA1-205ENST00000447654 MYLK2Q9H1R3 596 aa20.58■□□□□ 0.89
HMGA1-205ENST00000447654 PCDH18Q9HCL0 1135 aa20.58■□□□□ 0.89
HMGA1-205ENST00000447654 CD209Q9NNX6 404 aa20.58■□□□□ 0.89
HMGA1-205ENST00000447654 POLLQ9UGP5 575 aa20.58■□□□□ 0.89
HMGA1-205ENST00000447654 RBM47A0AV96 593 aaKnown RBP20.58■□□□□ 0.88
HMGA1-205ENST00000447654 E2F6O75461 281 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 ASLP04424 464 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 VIL1P09327 827 aaKnown RBP20.58■□□□□ 0.88
HMGA1-205ENST00000447654 MAGEA10P43363 369 aaPredicted RBP20.58■□□□□ 0.88
HMGA1-205ENST00000447654 USP46P62068 366 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 DR1Q01658 176 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 SLC34A1Q06495 639 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 GIT2Q14161 759 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 FAM83BQ5T0W9 1011 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 C12orf60Q5U649 245 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 TMTC3Q6ZXV5 915 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 ZC3H18Q86VM9 953 aaKnown RBP20.58■□□□□ 0.88
HMGA1-205ENST00000447654 NME8Q8N427 588 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 SLC44A5Q8NCS7 719 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 PPP2R3CQ969Q6 453 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 LENG1Q96BZ8 264 aaPredicted RBP20.58■□□□□ 0.88
HMGA1-205ENST00000447654 ZNF212Q9UDV6 495 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 STARD13Q9Y3M8 1113 aa20.58■□□□□ 0.88
HMGA1-205ENST00000447654 RPTORQ8N122 1335 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 TMEM120BA0PK00 339 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 POLRMTO00411 1230 aaKnown RBP20.57■□□□□ 0.88
HMGA1-205ENST00000447654 ATP9BO43861 1147 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 ITGA4P13612 1032 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 PTPN4P29074 926 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 BPIFB4P59827 614 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 AMPD3Q01432 767 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 SPTY2D1Q68D10 685 aaPredicted RBP20.57■□□□□ 0.88
HMGA1-205ENST00000447654 KLC3Q6P597 504 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 SLC7A6OSQ96CW6 309 aaPredicted RBP20.57■□□□□ 0.88
HMGA1-205ENST00000447654 LRRC37BQ96QE4 947 aa20.57■□□□□ 0.88
HMGA1-205ENST00000447654 TGS1Q96RS0 853 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms