RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 TYW1Q9NV66 732 aaKnown RBP12.4□□□□□ -0.42
GNE-203ENST00000447283 MAP3K20Q9NYL2 800 aaKnown RBP12.4□□□□□ -0.42
GNE-203ENST00000447283 KRIT1O00522 736 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 NFIBO00712 420 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 KIF3CO14782 793 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 TBX3O15119 743 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 AKAP3O75969 853 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 BRD2P25440 801 aaKnown RBP12.4□□□□□ -0.42
GNE-203ENST00000447283 RPA1P27694 616 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
GNE-203ENST00000447283 DRP2Q13474 957 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 PLS1Q14651 629 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 PLCB4Q15147 1175 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 SPRYD7Q5W111 196 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 GPAT2Q6NUI2 795 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 NT5DC3Q86UY8 548 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 DDX42Q86XP3 938 aaKnown RBP eCLIP12.4□□□□□ -0.42
GNE-203ENST00000447283 ERMNQ8TAM6 284 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 HES6Q96HZ4 224 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 REEP2Q9BRK0 252 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 DDX47Q9H0S4 455 aaKnown RBP12.4□□□□□ -0.42
GNE-203ENST00000447283 TTC7AQ9ULT0 858 aaPredicted RBP12.4□□□□□ -0.42
GNE-203ENST00000447283 DNM3Q9UQ16 869 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 RIPK3Q9Y572 518 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 STK24Q9Y6E0 443 aa12.4□□□□□ -0.42
GNE-203ENST00000447283 E7EVH7 732 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 MYO1FO00160 1098 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 DDX3XO00571 662 aaKnown RBP eCLIP12.39□□□□□ -0.435e-11■■■□□ 15.2
GNE-203ENST00000447283 SPATA31C1P0DKV0 1188 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 RPL13P26373 211 aaKnown RBP12.39□□□□□ -0.43
GNE-203ENST00000447283 HPDP32754 393 aaPredicted RBP12.39□□□□□ -0.43
GNE-203ENST00000447283 HSD17B4P51659 736 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 PDE4CQ08493 712 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 TKFCQ3LXA3 575 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 SMC1BQ8NDV3 1235 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 CCDC26Q8TAB7 109 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 SLC35C1Q96A29 364 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 CABS1Q96KC9 395 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 ASTN1O14525 1302 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 PASKQ96RG2 1323 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 GMNCA6NCL1 334 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 TMCO5BA8MYB1 307 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 TRAPPC3O43617 180 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 NR3C1P04150 777 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 PAEPP09466 180 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 FERP16591 822 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 SREBF1P36956 1147 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 PSMC6P62333 389 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 ARHGAP4P98171 946 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 GHRHRQ02643 423 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 Q4G0T1 1027 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 SPDYCQ5MJ68 293 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 TMC3Q7Z5M5 1100 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 DHX37Q8IY37 1157 aaKnown RBP12.39□□□□□ -0.43
GNE-203ENST00000447283 OR2W6PQ8NHA6 318 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 CYFIP2Q96F07 1278 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 EHMT1Q9H9B1 1298 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 FAM114A2Q9NRY5 505 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 RNF146Q9NTX7 359 aa12.39□□□□□ -0.43
GNE-203ENST00000447283 AJAP1Q9UKB5 411 aaPredicted RBP12.39□□□□□ -0.43
GNE-203ENST00000447283 SMCHD1A6NHR9 2005 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 PTPRFP10586 1907 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 NCANO14594 1321 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 CCL15-CCL14A0A0B4J2E2 113 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 ITGA4P13612 1032 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 ZNF157P51786 506 aaPredicted RBP12.38□□□□□ -0.43
GNE-203ENST00000447283 POU5F1Q01860 360 aaKnown RBP12.38□□□□□ -0.43
GNE-203ENST00000447283 ACTN3Q08043 901 aaPredicted RBP12.38□□□□□ -0.43
GNE-203ENST00000447283 CCL15Q16663 113 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 DCAF17Q5H9S7 520 aaPredicted RBP12.38□□□□□ -0.43
GNE-203ENST00000447283 SAPCD2Q86UD0 394 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 DNAAF5Q86Y56 855 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 SLC30A5Q8TAD4 765 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 OLIG1Q8TAK6 271 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 UIMC1Q96RL1 719 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 GCNT4Q9P109 453 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 AMACRQ9UHK6 382 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 PNMA3Q9UL41 463 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 DIS3Q9Y2L1 958 aaKnown RBP12.38□□□□□ -0.43
GNE-203ENST00000447283 RLFQ13129 1914 aa12.38□□□□□ -0.43
GNE-203ENST00000447283 C5orf60A6NFR6 353 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 H0YHG0 523 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 DAPK3O43293 454 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 FLT3P36888 993 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 RPS6P62753 249 aaKnown RBP12.37□□□□□ -0.43
GNE-203ENST00000447283 PPP2R2AP63151 447 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 NSMFQ6X4W1 530 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 RNF207Q6ZRF8 634 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 DAAM2Q86T65 1068 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 UBLCP1Q8WVY7 318 aaPredicted RBP12.37□□□□□ -0.43
GNE-203ENST00000447283 BORCS6Q96GS4 357 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 CENPHQ9H3R5 247 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 PPANQ9NQ55 473 aaKnown RBP12.37□□□□□ -0.43
GNE-203ENST00000447283 BTBD7Q9P203 1132 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 SLC45A1Q9Y2W3 748 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 TTI1O43156 1089 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 CYP3A4P08684 503 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 ZNF76P36508 570 aa12.37□□□□□ -0.43
GNE-203ENST00000447283 STAT1P42224 750 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms