RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 MICAL1Q8TDZ2 1067 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 LMBR1Q8WVP7 490 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 SEC16BQ96JE7 1060 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 FAM213AQ9BRX8 229 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 DNAI2Q9GZS0 605 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 GPBP1L1Q9HC44 474 aaPredicted RBP12.14□□□□□ -0.47
PTCH2-203ENST00000447098 UBE2TQ9NPD8 197 aaPredicted RBP12.14□□□□□ -0.47
PTCH2-203ENST00000447098 A0A1W2PQJ5 194 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 ZBTB39O15060 712 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 MYL3P08590 195 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 PTPRAP18433 802 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 CNTN2Q02246 1040 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 FUT2Q10981 343 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 KCNH2Q12809 1159 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 CDR2LQ86X02 465 aaPredicted RBP12.14□□□□□ -0.47
PTCH2-203ENST00000447098 PHF20L1A8MW92 1017 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 IRF6O14896 467 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 SARNPP82979 210 aaKnown RBP12.14□□□□□ -0.47
PTCH2-203ENST00000447098 TTLL4Q14679 1199 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 HAUS6Q7Z4H7 955 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 GUF1Q8N442 669 aaKnown RBP12.14□□□□□ -0.47
PTCH2-203ENST00000447098 SYTL5Q8TDW5 730 aaPredicted RBP12.14□□□□□ -0.47
PTCH2-203ENST00000447098 P2RX7Q99572 595 aaKnown RBP12.14□□□□□ -0.47
PTCH2-203ENST00000447098 TLR10Q9BXR5 811 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 POLR3FQ9H1D9 316 aaPredicted RBP12.14□□□□□ -0.47
PTCH2-203ENST00000447098 ATP6V0A4Q9HBG4 840 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 ATP8A1Q9Y2Q0 1164 aa12.14□□□□□ -0.47
PTCH2-203ENST00000447098 ZC3H4Q9UPT8 1303 aaKnown RBP12.13□□□□□ -0.47
PTCH2-203ENST00000447098 HGSO14964 777 aaPredicted RBP12.13□□□□□ -0.47
PTCH2-203ENST00000447098 STAT5BP51692 787 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 CUL1Q13616 776 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 DCUN1D2Q6PH85 259 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 TBC1D1Q86TI0 1168 aaPredicted RBP12.13□□□□□ -0.47
PTCH2-203ENST00000447098 KIRREL3Q8IZU9 778 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 MTMR8Q96EF0 704 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 MSTO1Q9BUK6 570 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 KIAA1683Q9H0B3 1180 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 UNC45AQ9H3U1 944 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 COL18A1P39060 1754 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 DYNC1LI2O43237 492 aaPredicted RBP12.13□□□□□ -0.47
PTCH2-203ENST00000447098 SERPING1P05155 500 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 YARSP54577 528 aaKnown RBP12.13□□□□□ -0.47
PTCH2-203ENST00000447098 FKBP1AP62942 108 aaKnown RBP12.13□□□□□ -0.47
PTCH2-203ENST00000447098 CDK17Q00537 523 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 TMEM62Q0P6H9 643 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 TKFCQ3LXA3 575 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 FAM133BQ5BKY9 247 aaKnown RBP12.13□□□□□ -0.47
PTCH2-203ENST00000447098 YTHDF3Q7Z739 585 aaKnown RBP12.13□□□□□ -0.47
PTCH2-203ENST00000447098 DDX42Q86XP3 938 aaKnown RBP eCLIP12.13□□□□□ -0.47
PTCH2-203ENST00000447098 CDCA5Q96FF9 252 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 TMEM206Q9H813 350 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 PARP2Q9UGN5 583 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 FBXL5Q9UKA1 691 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 KIF4AO95239 1232 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 ORC2Q13416 577 aaPredicted RBP12.13□□□□□ -0.47
PTCH2-203ENST00000447098 LRRC71Q8N4P6 559 aa12.13□□□□□ -0.47
PTCH2-203ENST00000447098 DUSP9Q99956 384 aaKnown RBP12.13□□□□□ -0.47
PTCH2-203ENST00000447098 GRID2IPA4D2P6 1211 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 ZNF263O14978 683 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 RPA1P27694 616 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 SREBF1P36956 1147 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 MYO1EQ12965 1108 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 PREPLQ4J6C6 727 aaPredicted RBP12.12□□□□□ -0.47
PTCH2-203ENST00000447098 PDXDC1Q6P996 788 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 NT5C1BQ96P26 610 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 RUSC1Q9BVN2 902 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 DDX47Q9H0S4 455 aaKnown RBP12.12□□□□□ -0.47
PTCH2-203ENST00000447098 GBA2Q9HCG7 927 aaPredicted RBP12.12□□□□□ -0.47
PTCH2-203ENST00000447098 PGRMC1O00264 195 aaKnown RBP12.12□□□□□ -0.47
PTCH2-203ENST00000447098 VWA5AO00534 786 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 SFNP31947 248 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 IFNAR2P48551 515 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 SOX10P56693 466 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 KLHDC7AQ5VTJ3 777 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 MCPH1Q8NEM0 835 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 RGS17Q9UGC6 210 aaPredicted RBP12.12□□□□□ -0.47
PTCH2-203ENST00000447098 DDX20Q9UHI6 824 aaKnown RBP12.12□□□□□ -0.47
PTCH2-203ENST00000447098 CPA4Q9UI42 421 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 NHSL1Q5SYE7 1610 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 ADAMTS3O15072 1205 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 HSD17B3P37058 310 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 FXR2P51116 673 aaKnown RBP eCLIP12.12□□□□□ -0.47
PTCH2-203ENST00000447098 TFDP1Q14186 410 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 UHMK1Q8TAS1 419 aaKnown RBP12.12□□□□□ -0.47
PTCH2-203ENST00000447098 UPF1Q92900 1129 aaKnown RBP eCLIP12.12□□□□□ -0.47
PTCH2-203ENST00000447098 MRIQ9BWK5 157 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 TMBIM4Q9HC24 238 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 STK38LQ9Y2H1 464 aa12.12□□□□□ -0.47
PTCH2-203ENST00000447098 H0YCG3 227 aa12.11□□□□□ -0.47
PTCH2-203ENST00000447098 TNNC2P02585 160 aa12.11□□□□□ -0.47
PTCH2-203ENST00000447098 H2AFZP0C0S5 128 aa12.11□□□□□ -0.47
PTCH2-203ENST00000447098 PRKCEQ02156 737 aa12.11□□□□□ -0.47
PTCH2-203ENST00000447098 IL17AQ16552 155 aa12.11□□□□□ -0.47
PTCH2-203ENST00000447098 FIGNQ5HY92 759 aa12.11□□□□□ -0.47
PTCH2-203ENST00000447098 H2AFVQ71UI9 128 aa12.11□□□□□ -0.47
PTCH2-203ENST00000447098 KCNK18Q7Z418 384 aa12.11□□□□□ -0.47
PTCH2-203ENST00000447098 CCDC25Q86WR0 208 aa12.11□□□□□ -0.47
PTCH2-203ENST00000447098 FBXO16Q8IX29 292 aaPredicted RBP12.11□□□□□ -0.47
PTCH2-203ENST00000447098 IQCKQ8N0W5 287 aa12.11□□□□□ -0.47
PTCH2-203ENST00000447098 RNF149Q8NC42 400 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms