RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 PTK2BQ14289 1009 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 KRT35Q92764 455 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 EIF2AK1Q9BQI3 630 aaKnown RBP9.11□□□□□ -0.95
PTPN3-204ENST00000446349 COLEC11Q9BWP8 271 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 ANKEF1Q9NU02 776 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 NEURL4Q96JN8 1562 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 MANSC4A6NHS7 340 aaPredicted RBP9.11□□□□□ -0.95
PTPN3-204ENST00000446349 YWHABP31946 246 aaKnown RBP9.11□□□□□ -0.95
PTPN3-204ENST00000446349 R3HDM1Q15032 1099 aaKnown RBP9.11□□□□□ -0.95
PTPN3-204ENST00000446349 MTMR4Q9NYA4 1195 aa9.11□□□□□ -0.95
PTPN3-204ENST00000446349 TTC36A6NLP5 189 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 ERCC3P19447 782 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 MX2P20592 715 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 SAT1P21673 171 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 KLHL38Q2WGJ6 581 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 NOTUMQ6P988 496 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 NSUN4Q96CB9 384 aaKnown RBP9.1□□□□□ -0.95
PTPN3-204ENST00000446349 KDM4CQ9H3R0 1056 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 MTSS1O43312 755 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 INHBEP58166 350 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 NKX1-1Q15270 411 aaPredicted RBP9.1□□□□□ -0.95
PTPN3-204ENST00000446349 SLC7A5P2Q9GIP4 190 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 RABEP2Q9H5N1 569 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 GSTA4O15217 222 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 EGFRP00533 1210 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 RALBP11234 206 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 HMGCS2P54868 508 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 NR5A1Q13285 461 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 MTBPQ96DY7 904 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 CDK5RAP1Q96SZ6 601 aaKnown RBP9.1□□□□□ -0.95
PTPN3-204ENST00000446349 ARHGAP42A6NI28 874 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 PDXKO00764 312 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 GPR182O15218 404 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 CASP14P31944 242 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 SYDE1Q6ZW31 735 aaPredicted RBP9.1□□□□□ -0.95
PTPN3-204ENST00000446349 ANKS3Q6ZW76 656 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 FAM133AQ8N9E0 248 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 CLGNO14967 610 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 ZW10O43264 779 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 GNA15P30679 374 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 ALDH1A3P47895 512 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 VPS41P49754 854 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 ARHGDIAP52565 204 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 ZNF543Q08ER8 600 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 TRADDQ15628 312 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 HSP90AA5PQ58FG0 334 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 ALKBH5Q6P6C2 394 aaKnown RBP9.1□□□□□ -0.95
PTPN3-204ENST00000446349 FMO2Q99518 471 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 NHEJ1Q9H9Q4 299 aaPredicted RBP9.1□□□□□ -0.95
PTPN3-204ENST00000446349 CAMTA2O94983 1202 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 SLC2A3P11169 496 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 CDC27P30260 824 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 FOXO4P98177 505 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 DYDC2Q96IM9 177 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 INTS9Q9NV88 658 aaKnown RBP9.1□□□□□ -0.95
PTPN3-204ENST00000446349 PCDHA13Q9Y5I0 950 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 SMAPO00193 183 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 HIP1RO75146 1068 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 RPS6KA5O75582 802 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 RESTQ13127 1097 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 REM2Q8IYK8 340 aaPredicted RBP9.1□□□□□ -0.95
PTPN3-204ENST00000446349 ANKRD42Q8N9B4 389 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 MIPOL1Q8TD10 442 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 UCMAQ8WVF2 138 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 UPF3AQ9H1J1 476 aaKnown RBP9.1□□□□□ -0.95
PTPN3-204ENST00000446349 DSEQ9UL01 958 aa9.1□□□□□ -0.95
PTPN3-204ENST00000446349 ITGA4P13612 1032 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 DCUN1D1Q96GG9 259 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 PPCSQ9HAB8 311 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 GDAQ9Y2T3 454 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 A8MXQ7 604 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 PRKCBP05771 671 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 FBXL13Q8NEE6 735 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 GPRASP2Q96D09 838 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 GDAP1L1Q96MZ0 367 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 GGA3Q9NZ52 723 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 CACNA1FO60840 1977 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 ADCK5Q3MIX3 580 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 FSCBQ5H9T9 825 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 ANGEL2Q5VTE6 544 aaKnown RBP9.09□□□□□ -0.95
PTPN3-204ENST00000446349 HEATR6Q6AI08 1181 aaKnown RBP9.09□□□□□ -0.95
PTPN3-204ENST00000446349 ZNF746Q6NUN9 644 aaPredicted RBP9.09□□□□□ -0.95
PTPN3-204ENST00000446349 CCSER1Q9C0I3 900 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 PIN4Q9Y237 131 aaKnown RBP9.09□□□□□ -0.95
PTPN3-204ENST00000446349 DEPDC5O75140 1603 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 E5RI56 91 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 CSF1RP07333 972 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 C6orf222P0C671 652 aaPredicted RBP9.09□□□□□ -0.95
PTPN3-204ENST00000446349 VEGFAP15692 232 aaPredicted RBP9.09□□□□□ -0.95
PTPN3-204ENST00000446349 ZNF235Q14590 738 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 SGSM1Q2NKQ1 1148 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 SPOPLQ6IQ16 392 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 BANK1Q8NDB2 785 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 FAF2Q96CS3 445 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 OTUB1Q96FW1 271 aaPredicted RBP9.09□□□□□ -0.95
PTPN3-204ENST00000446349 FAM213AQ9BRX8 229 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 SMYD2Q9NRG4 433 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 NDE1Q9NXR1 346 aa9.09□□□□□ -0.95
PTPN3-204ENST00000446349 PLEKHA8P1O95397 391 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms