RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 PRKAG2Q9UGJ0 569 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 DACH1Q9UI36 760 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 ST3GAL5Q9UNP4 418 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 UMODL1Q5DID0 1318 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 PSMA7O14818 248 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 KIAA0355O15063 1070 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 GPR182O15218 404 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 ERLIN2O94905 339 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 RAG1P15918 1043 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 SFPQP23246 707 aaKnown RBP eCLIP19.11■□□□□ 0.65
SGCE-206ENST00000445866 LPIN1Q14693 890 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 FAM187BQ17R55 369 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 BMT2Q1RMZ1 405 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 MAP4K3Q8IVH8 894 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 USP38Q8NB14 1042 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 DHTKD1Q96HY7 919 aaPredicted RBP19.11■□□□□ 0.65
SGCE-206ENST00000445866 TARS2Q9BW92 718 aaKnown RBP19.11■□□□□ 0.65
SGCE-206ENST00000445866 MRPL4Q9BYD3 311 aaKnown RBP19.11■□□□□ 0.65
SGCE-206ENST00000445866 IKZF4Q9H2S9 585 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 SQORQ9Y6N5 450 aa19.11■□□□□ 0.65
SGCE-206ENST00000445866 RBAK-RBAKDNI3L0D1 243 aa19.1■□□□□ 0.65
SGCE-206ENST00000445866 EVI5O60447 810 aa19.1■□□□□ 0.65
SGCE-206ENST00000445866 TIMP1P01033 207 aa19.1■□□□□ 0.65
SGCE-206ENST00000445866 PCBP1Q15365 356 aaKnown RBP eCLIP19.1■□□□□ 0.65
SGCE-206ENST00000445866 FAM228AQ86W67 206 aa19.1■□□□□ 0.65
SGCE-206ENST00000445866 C7orf61Q8IZ16 206 aa19.1■□□□□ 0.65
SGCE-206ENST00000445866 SCLYQ96I15 445 aa19.1■□□□□ 0.65
SGCE-206ENST00000445866 PRIMPOLQ96LW4 560 aa19.1■□□□□ 0.65
SGCE-206ENST00000445866 GBP3Q9H0R5 595 aa19.1■□□□□ 0.65
SGCE-206ENST00000445866 DNAJC25Q9H1X3 360 aa19.1■□□□□ 0.65
SGCE-206ENST00000445866 AGO3Q9H9G7 860 aaKnown RBP19.1■□□□□ 0.65
SGCE-206ENST00000445866 PADI3Q9ULW8 664 aa19.1■□□□□ 0.65
SGCE-206ENST00000445866 MKI67P46013 3256 aaKnown RBP19.09■□□□□ 0.65
SGCE-206ENST00000445866 TTLL13PA6NNM8 815 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 B4GALT5O43286 388 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 CD52P31358 61 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 LIG4P49917 911 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 PAK2Q13177 524 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 MBTPS1Q14703 1052 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 AMHR2Q16671 573 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 ANO6Q4KMQ2 910 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 PPP4R3CPQ6ZMV5 832 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 TSHZ1Q6ZSZ6 1077 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 NELFBQ8WX92 580 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 ACO2Q99798 780 aaKnown RBP19.09■□□□□ 0.65
SGCE-206ENST00000445866 TCHPQ9BT92 498 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 FUCA2Q9BTY2 467 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 SEMA6BQ9H3T3 888 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 UBE4BO95155 1302 aa19.09■□□□□ 0.65
SGCE-206ENST00000445866 ANKRD63C9JTQ0 380 aa19.08■□□□□ 0.65
SGCE-206ENST00000445866 HNRNPDLO14979 420 aaKnown RBP19.08■□□□□ 0.65
SGCE-206ENST00000445866 TSPAN1O60635 241 aa19.08■□□□□ 0.65
SGCE-206ENST00000445866 PARNO95453 639 aaKnown RBP19.08■□□□□ 0.65
SGCE-206ENST00000445866 STX17P56962 302 aa19.08■□□□□ 0.65
SGCE-206ENST00000445866 LRSAM1Q6UWE0 723 aa19.08■□□□□ 0.65
SGCE-206ENST00000445866 HS2ST1Q7LGA3 356 aa19.08■□□□□ 0.65
SGCE-206ENST00000445866 P2RX5Q93086 422 aa19.08■□□□□ 0.65
SGCE-206ENST00000445866 CPB2Q96IY4 423 aa19.08■□□□□ 0.65
SGCE-206ENST00000445866 NAT10Q9H0A0 1025 aaKnown RBP19.08■□□□□ 0.65
SGCE-206ENST00000445866 WNT8AQ9H1J5 351 aa19.08■□□□□ 0.65
SGCE-206ENST00000445866 KCTD10Q9H3F6 313 aa19.08■□□□□ 0.65
SGCE-206ENST00000445866 CTNND2Q9UQB3 1225 aa19.08■□□□□ 0.65
SGCE-206ENST00000445866 MYH9P35579 1960 aaKnown RBP19.08■□□□□ 0.65
SGCE-206ENST00000445866 PDXKO00764 312 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 TGFB1I1O43294 461 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 NBNO60934 754 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 EDN1P05305 212 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 CCNE1P24864 410 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 ITGB8P26012 769 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 HOXA11P31270 313 aaPredicted RBP19.08■□□□□ 0.64
SGCE-206ENST00000445866 MATR3P43243 847 aaKnown RBP eCLIP19.08■□□□□ 0.642e-7■■■■□ 22.3
SGCE-206ENST00000445866 ZNF445P59923 1031 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 PAK1Q13153 545 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 GPNMBQ14956 572 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 CT47A1Q5JQC4 288 aaPredicted RBP19.08■□□□□ 0.64
SGCE-206ENST00000445866 ATF7IP2Q5U623 682 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 ANKRD40Q6AI12 368 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 CENPPQ6IPU0 288 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 ZPBP2Q6X784 338 aa19.08■□□□□ 0.64
SGCE-206ENST00000445866 CLIC2O15247 247 aa19.07■□□□□ 0.64
SGCE-206ENST00000445866 ARF4P18085 180 aaPredicted RBP19.07■□□□□ 0.64
SGCE-206ENST00000445866 ERCC5P28715 1186 aaPredicted RBP19.07■□□□□ 0.64
SGCE-206ENST00000445866 C11orf57Q6ZUT1 292 aaPredicted RBP19.07■□□□□ 0.64
SGCE-206ENST00000445866 CDR2LQ86X02 465 aaPredicted RBP19.07■□□□□ 0.64
SGCE-206ENST00000445866 GOLGA5Q8TBA6 731 aa19.07■□□□□ 0.64
SGCE-206ENST00000445866 ZBTB45Q96K62 511 aaPredicted RBP19.07■□□□□ 0.64
SGCE-206ENST00000445866 TSG101Q99816 390 aa19.07■□□□□ 0.64
SGCE-206ENST00000445866 IFIH1Q9BYX4 1025 aaKnown RBP19.07■□□□□ 0.64
SGCE-206ENST00000445866 TSPY26PQ9H489 355 aa19.07■□□□□ 0.64
SGCE-206ENST00000445866 ERVK-5Q9HDB9 667 aa19.07■□□□□ 0.64
SGCE-206ENST00000445866 RWDD2AQ9UIY3 292 aa19.07■□□□□ 0.64
SGCE-206ENST00000445866 PIN4Q9Y237 131 aaKnown RBP19.07■□□□□ 0.64
SGCE-206ENST00000445866 A0A1B0GUA9 196 aa19.06■□□□□ 0.64
SGCE-206ENST00000445866 TISP43B9A030 160 aa19.06■□□□□ 0.64
SGCE-206ENST00000445866 CLDN3O15551 220 aa19.06■□□□□ 0.64
SGCE-206ENST00000445866 CALUO43852 315 aaPredicted RBP19.06■□□□□ 0.64
SGCE-206ENST00000445866 TOM1L1O75674 476 aa19.06■□□□□ 0.64
SGCE-206ENST00000445866 PIGRP01833 764 aa19.06■□□□□ 0.64
SGCE-206ENST00000445866 ZSCAN20P17040 1043 aaPredicted RBP19.06■□□□□ 0.64
SGCE-206ENST00000445866 AXLP30530 894 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms